 Einar Ryeng
|
ca51a0b382
|
Added mat2ftsv to naïvely convert matlab matrices to ftsv files. Works in at
least one case, but does not try to guess anything sensible for identifiers.
|
2007-10-31 17:43:02 +00:00 |
 Arnar Flatberg
|
b114d5aeec
|
New crossval index generator
|
2007-09-25 06:31:40 +00:00 |
|
Arnar Flatberg
|
18f33decc7
|
Finnished the l-pls fdr
|
2007-09-21 13:16:40 +00:00 |
|
Arnar Flatberg
|
6698ebe932
|
Removed actiavtion in dimcontroller
opt. of compare func
|
2007-09-20 16:12:58 +00:00 |
|
Arnar Flatberg
|
41f93c5989
|
....
|
2007-09-20 16:11:37 +00:00 |
|
Arnar Flatberg
|
7e9a0882f1
|
Updates
|
2007-09-20 16:10:40 +00:00 |
|
Arnar Flatberg
|
d9e5398865
|
GO (id, description, definition, ontology)
|
2007-08-28 09:39:24 +00:00 |
|
Arnar Flatberg
|
16ed2fd9c9
|
u
|
2007-08-24 11:48:29 +00:00 |
|
Arnar Flatberg
|
dc43830752
|
HS-entrez annotations
|
2007-08-24 09:15:16 +00:00 |
|
Arnar Flatberg
|
7dbf28f65d
|
... just lots of stuff
|
2007-08-24 09:14:24 +00:00 |
|
Arnar Flatberg
|
21b63b17e5
|
Fixed axis bug in barplot
|
2007-08-24 09:13:34 +00:00 |
|
Arnar Flatberg
|
7538710144
|
Enabled tree lines and set sensitivity on transforms
|
2007-08-24 09:12:52 +00:00 |
|
Arnar Flatberg
|
fa4604dbe5
|
load dataset defaults to datadir
|
2007-08-22 14:05:51 +00:00 |
|
Arnar Flatberg
|
01ef4bdedd
|
Added support for identifiers sorting, and selection
|
2007-08-22 13:41:04 +00:00 |
|
Arnar Flatberg
|
ffe1ce6319
|
Fixed queries
|
2007-08-22 13:40:33 +00:00 |
|
Arnar Flatberg
|
6ba8c6eb67
|
ups
|
2007-08-21 10:31:09 +00:00 |
|
Arnar Flatberg
|
e06eeb6d17
|
ups
|
2007-08-21 10:25:23 +00:00 |
|
Einar Ryeng
|
26ab6c3fe7
|
Added a "decimals" parameter to write_ftsv, so that datasets can be written
without full precision. Defaults to 7 digits after decimal point.
|
2007-08-16 10:02:54 +00:00 |
|
Arnar Flatberg
|
a6af506ae0
|
The reduced Uma X, for use in Lpls
|
2007-08-16 09:46:33 +00:00 |
|
Arnar Flatberg
|
fc91d17bdc
|
The Uma affy, nci60 + drug data + tissue type
|
2007-08-16 09:17:07 +00:00 |
|
Arnar Flatberg
|
d510e092e3
|
Added SAM and conditioned enrichment analysis
|
2007-08-14 16:16:31 +00:00 |
|
Arnar Flatberg
|
8d4848d5fa
|
Added explained variance
|
2007-08-14 16:12:28 +00:00 |
|
Arnar Flatberg
|
004cfe0a9f
|
Quick fix for gray on NaNs
|
2007-08-14 16:10:35 +00:00 |
|
Einar Ryeng
|
13b35180ee
|
Fixed bug in DAG plot color mapping.
|
2007-08-08 12:24:14 +00:00 |
|
Einar Ryeng
|
e08dba0924
|
read_ftsv and write_ftsv now supports filenames as well as file descriptors.
|
2007-08-08 12:23:45 +00:00 |
|
Einar Ryeng
|
04126e9c83
|
New information content datasets.
|
2007-08-08 10:13:05 +00:00 |
|
Arnar Flatberg
|
46c2a0c149
|
New calculations (Z), based on updated X data
|
2007-08-07 11:45:16 +00:00 |
|
Arnar Flatberg
|
916fc4c046
|
Added scaling to navigator menu, moved transformations to a separate sub menu
|
2007-08-07 11:42:07 +00:00 |
|
Arnar Flatberg
|
168384f266
|
Cleaned esvd routine, added subfunc scale
|
2007-08-07 11:41:03 +00:00 |
|
Arnar Flatberg
|
d055a1f882
|
Some .....
|
2007-08-07 11:39:16 +00:00 |
|
Einar Ryeng
|
4b80baf225
|
Added information content drag'n'drop to z loadings plot.
|
2007-08-06 16:20:39 +00:00 |
|
Arnar Flatberg
|
72e300c95e
|
Addded automatic bin selection in histogram plot
|
2007-08-04 10:37:22 +00:00 |
|
Einar Ryeng
|
3f7215bc35
|
Factored out a mixin class for IC thresholding.
|
2007-08-03 12:09:17 +00:00 |
|
Arnar Flatberg
|
0523ebab05
|
Added dataset transpose option
|
2007-08-03 09:44:31 +00:00 |
|
Arnar Flatberg
|
e62a6ae9b3
|
Removed print statements
|
2007-08-02 14:51:53 +00:00 |
|
Arnar Flatberg
|
0758ab8bfb
|
Fixed histogram plot to accept selections of one, and made ad-hoc choice of proportional color to patches
|
2007-08-02 14:37:19 +00:00 |
|
Arnar Flatberg
|
7a0e2481eb
|
Full corrected X data
|
2007-08-02 11:22:05 +00:00 |
|
Einar Ryeng
|
94f4b276b9
|
Fixed selection in DAG-plot to work both with and without IC set.
|
2007-08-02 11:20:30 +00:00 |
|
Arnar Flatberg
|
b334e94b15
|
New and corrected smokers data
|
2007-08-02 11:19:47 +00:00 |
|
Arnar Flatberg
|
438e7cb918
|
Irrelevant play
|
2007-08-02 11:19:16 +00:00 |
|
Arnar Flatberg
|
2d419a9862
|
Added GO-category enrichment analysis
|
2007-08-02 11:18:48 +00:00 |
|
Arnar Flatberg
|
973470b595
|
stuff
|
2007-08-02 11:18:18 +00:00 |
|
Einar Ryeng
|
da5b977042
|
Moved less important datasets into a subfolder named "secondary".
|
2007-08-02 10:52:58 +00:00 |
|
Arnar Flatberg
|
83d76eac4f
|
Fixed vorrect namespace for scipy funcs
|
2007-08-02 10:44:06 +00:00 |
|
Einar Ryeng
|
b233e4abc6
|
Added spin buttons for minimum and maximum information content in DAG plot.
|
2007-08-02 10:20:33 +00:00 |
|
Arnar Flatberg
|
dc3893eecc
|
Fixed a "main.project" bug
|
2007-08-02 10:19:16 +00:00 |
|
Einar Ryeng
|
f12fe23c1b
|
Fixed docstrings.
|
2007-08-02 10:08:52 +00:00 |
|
Einar Ryeng
|
4c24061575
|
Fixed docstrings.
|
2007-08-02 10:08:27 +00:00 |
|
Einar Ryeng
|
63d6347f37
|
Fixed makefile to not use lots of space on inherited function documentation.
|
2007-08-02 10:04:06 +00:00 |
|
Einar Ryeng
|
6e4db7ebe4
|
Fixed plot focus signal problem.
|
2007-07-31 12:25:56 +00:00 |