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The Uma affy, nci60 + drug data + tissue type

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Arnar Flatberg 2007-08-16 09:17:07 +00:00
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# type: dataset
# dimension: cline BR:MCF7 BR:MDA_MB_231 BR:HS578T BR:BT_549 BR:T47D CNS:SF_268 CNS:SF_295 CNS:SF_539 CNS:SNB_19 CNS:SNB_75 CNS:U251 CO:COLO205 CO:HCC_2998 CO:HCT_116 CO:HCT_15 CO:HT29 CO:KM12 CO:SW_620 LE:CCRF_CEM LE:HL_60 LE:K_562 LE:MOLT_4 LE:RPMI_8226 LE:SR ME:LOXIMVI ME:MALME_3M ME:M14 ME:SK_MEL_2 ME:SK_MEL_28 ME:SK_MEL_5 ME:UACC_257 ME:UACC_62 ME:MDA_MB_435 ME:MDA_N LC:A549 LC:EKVX LC:HOP_62 LC:HOP_92 LC:NCI_H226 LC:NCI_H322M LC:NCI_H460 LC:NCI_H522 OV:IGROV1 OV:OVCAR_3 OV:OVCAR_4 OV:OVCAR_5 OV:OVCAR_8 OV:SK_OV_3 OV:NCI_ADR_RES PR:PC_3 PR:DU_145 RE:786_0 RE:A498 RE:ACHN RE:CAKI_1 RE:RXF_393 RE:SN12C RE:TK_10 RE:UO_31
# dimension: drug 26980 56410 409962 178248 338947 79037 353451 95466 95441 167780 750 241240 3088 119875 348948 271674 132313 182986 73754 329680 256927 762 8806 344007 135758 25154 172112 296934 363812 6396 9706 34462 102627 94600 249910 176323 629971 603071 107124 606172 606173 606497 606985 610456 618939 308847 249992 355644 337766 82151 267469 123127 141540 269148 301739 349174 122819 164011 109229 357704 142982 354646 268242 366140 264880 71851 102816 71261 752 132483 134033 184692 623017 633713 139105 740 174121 352122 1895 32065 51143 303812 145668 63878 27640 19893 148958 755 163501 126771 368390 153353 224131 143095 757 33410 376128 609395 153858 83265 49842 67574 125973 600222 656178 658831 661746 664402 664404 666608 671867 671870 673187 673188 330500 95678 107392 118994
# name: D118
6.71785 6.15684 4.07802 2.90309 3.70543 4.29629 3.87884 3.46447 4.34616 5.36727 3.33767 3.80814 4.44105 5.47088 4.316135 5.78816 4.90423 5.65426 3.5697 3.92808 4.67851 5.71265 4.93023 4.27091 7.0 4.25778 3.99809 5.29699 6.21678 4.466685 5.62404 4.75422 3.183455 8.0 8.0 6.0 8.0 8.0 8.12494 6.72754 5.92815 7.15923 7.60085 7.54174 8.06861 5.81394 7.026725 7.40892 7.35452 8.30103 8.270715 7.72946 5.94109 7.03168 8.60206 6.321435 7.29338 7.257565 -0.12563 10.516395 5.2543 7.53597 4.84918 6.5568 4.96043 3.96448 6.063835 6.26962 6.13484 6.99785 7.23762 8.0 8.0 8.44011 7.563255 7.87123 8.78663 8.8261 2.46959 3.417025 2.895575 5.438285 6.225125 6.909695 8.41101 5.78298 3.240585 5.73844 6.1825 5.04012 6.62721 5.97621 3.51706 6.13585 7.942935 8.0 9.5469025 9.149241 8.411045 6.33946 9.60206 7.0 7.81158 6.61223 6.33429 5.990745 7.53775 7.50852 9.0 8.014905 8.58643 6.94807 7.4682 8.476255 6.82455 6.073475 5.42617 4.121845
5.07043 4.392485 4.03743 2.90309 3.49964 4.304055 3.65897 3.51376 4.303455 5.18739 3.0 3.60206 3.793715 4.740675 3.99445 4.772325 3.84713 5.109493125 3.297435 3.337185 4.198775 4.84769 4.219915 3.373235 5.65339 3.92761 3.68611 4.34599 4.471495 3.580515 4.6642 4.04838 2.537825 6.02817 5.079945 5.22074 5.677445 6.5841 7.02366285714 4.71276 4.793868125 5.172975 6.18569 5.412935 5.484895 5.28177 5.45626 6.01368 5.18294 6.656925 6.633995 6.33764 5.75726 5.60913 6.64297 5.384415 5.8649 6.26221 -0.92963 10.02469 4.99105714286 7.33294 4.72874 6.57927 3.986165 3.602615 6.37146 6.204455 5.755775 4.0 4.0 4.0 6.48679833333 7.0 4.0 5.0 7.0 6.0 2.0 2.60206 2.0 4.194795 4.131865 3.30103 5.18272 2.98539 2.30103 5.14387 3.15132 4.896275 4.93628 3.30103 2.88859 5.078935 6.462165 7.96591 9.38988375 8.652601875 8.222765 6.4022 9.26707 7.0 7.225955 5.924415 5.37833 4.17049 6.67724 5.22706 5.0 7.32169 7.370405 5.497815 5.339255 6.65979 6.68312 5.38168 4.62028 3.93023
5.45696 4.75949 3.9835 2.90309 3.691855 3.92932 3.621605 3.48949 4.22446 5.409305 3.0 3.903115 3.78546 5.13424 4.21879 5.05948 4.02884 5.080995 3.14825 3.23556 3.97337 4.296595 4.259795 3.54241 5.296015 3.756675 3.60206 4.425915 5.451685 3.42727 4.60427 4.048075 2.58694 6.08842 5.34493 4.89413 5.43773 5.3951 7.03340357143 4.56866 4.967510625 4.587695 6.0 4.835825 5.372695 5.307985 5.56657 6.479675 7.11963 6.81452 6.76007 6.523315 6.088605 5.251125 7.22234 6.13513 6.38031 6.457075 -0.86781 10.22934 5.03433214286 7.541715 4.746045 6.33357 4.61123 3.325165 6.09298 5.08475 5.3236 4.0 4.0 4.9104055 6.03440416667 7.0 4.0 5.0 7.007635 6.61976 2.0 2.84771 2.0 4.140595 3.0 3.30103 5.0 3.637935 2.31318 4.84125 5.48374 4.36419 4.680395 4.92065 2.387115 4.04065 6.89029 7.900315 9.597433125 8.92173625 8.23925 6.23198 9.60206 7.0 7.8056 5.954145 6.59804 6.702675 7.7308 7.31383 8.74533 7.718145 8.2614 6.65394 7.21621 8.27054 5.839215 4.46012 3.518575 3.26803
5.613885 4.914535 4.093075 3.39559 4.00233 5.27857 3.99801 3.63048 4.3441 5.26979 3.0 4.0081 3.985005 5.20942 4.43786 4.93436 4.52982 5.26229555556 3.50527 3.819725 4.41299 5.22906 4.47116 3.80895 5.78908 4.11696 3.72748388889 4.70398 5.59054 3.80378 4.7837 4.2162 2.82446 6.93993 7.866975 5.30613 7.17536 6.86219 7.30662777778 5.34111 5.26314666667 5.97931 6.3379 6.314875 7.270925 5.369 5.946165 6.54426 6.683595 6.72565 6.97389 6.45805 5.60674 5.71374 7.14945 6.15812 6.27722 6.51685 -1.3059 10.37642 5.02038555556 7.44885 4.56124 6.01725 5.04362 3.09968 6.14906 5.39462 5.56788 4.47797 4.58779 4.59528 5.25631875 7.0 4.0 5.22826 7.036035 6.0 2.0 2.75423 2.31468 4.202405 3.0 3.30103 5.958685 3.84829 2.3982 3.73744 5.13073 4.743845 4.24132 5.03814 2.493135 3.739675 7.685975 6.39816 9.59930722222 8.90381055556 9.67809 5.93241 9.60206 7.0 7.424305 5.77293277778 5.89815 5.58056 6.71268 6.46598 6.60457 7.092645 7.872695 6.16301 5.55091 6.19446 6.044467 5.80064 4.20976 3.36323
5.65978 5.03553 3.93558 3.219855 3.674795 4.44571 3.602995 3.59435 4.3144 5.6445 3.21072 3.60206 4.24797 4.810845 4.27817 5.59635 4.646025 5.14391055556 3.55249 3.672945 4.299285 6.50511 4.87131 4.17218 6.65317 3.809275 3.669430625 4.720715 5.94928 3.741315 5.09055 5.077 2.94026 7.64661 8.0 4.0 7.85988 8.0 7.358616875 6.38462 5.01197611111 6.692835 7.37028 7.186845 7.692325 5.25247 6.101305 6.20892 6.61112 7.18364 7.22919 6.96347 6.076605 6.0452 7.254 5.53141 6.79117 6.7218 -1.07733 10.045995 5.026376875 7.243255 5.00782 6.216355 4.933975 3.94111 6.60206 5.55614 5.845465 4.0 5.5624335 4.68818 5.36006928571 7.0 4.874435 5.73482 7.0 7.103445 2.0 2.90398 2.48243 4.350955 3.0 3.30103 6.12773 4.20051 2.47403 5.624095 5.17816 4.64153 4.43324 3.77851 2.38079 4.95232 4.1059 4.23409 9.34826611111 8.57629777778 8.122745 6.2413 5.60206 3.68243 7.010545 6.08473 4.0 5.75534 6.93157 5.866795 8.398675 5.6651 7.16919 4.60206 5.689155 8.030945 6.680095 5.46141 5.298285 4.06288
6.27943 5.300955 4.39397 3.978495 4.18371 4.615395 4.46766 4.37035 4.575 5.37966 3.368645 4.24976 4.48307 6.05623 4.7812 5.40664 4.42548 5.535445 3.48834 3.91334 4.40027 5.504685 4.72923 4.21318 6.45977 4.316315 4.06377 4.84648 5.85206 4.42117 5.54785 4.869305 3.0804 8.0 8.0 8.0 8.0 8.0 8.12494 6.4085 6.001615 7.12126 8.161775 7.41804 7.78302 5.212025 6.308335 7.02696 7.08203 7.10699 7.30061 6.9707 5.31629 5.99235 7.4243 5.865035 6.324875 6.5638 -0.41212 10.219545 4.99921 7.58401 4.8841 6.503 4.86293 3.65685 5.88541 6.12856 5.95357 6.43925 7.27722 8.0 7.39793 8.737335 7.45727 7.315535 8.42881 9.16115 2.21332 3.28494 2.551275 4.96995 5.08077 5.61782 7.85958 4.27906 2.471535 5.417585 5.93384 4.65737 6.80305 5.1102 4.02261 5.57592 7.35616 8.0 9.25098 8.38703 8.22889 6.01027 9.13841 7.0 7.53196 5.349785 5.401365 5.63449 6.794145 6.775085 8.31308 7.62162 6.693855 5.92129 6.73234 7.03164 5.91886 5.87705 5.27544 3.363915
6.81383 6.28128 4.3206 4.00879 4.34411 4.47376 4.509935 4.65021 4.56525 5.18218 3.37927 4.171195 4.401905 5.92509 4.92064 5.52122 4.873665 5.94859 3.364365 4.0673 4.30491 5.47829 4.752425 4.34301 6.81094 4.21333 3.96783 5.33578 6.00152 4.49834 5.555915 4.80155 3.32868 8.0 8.0 8.0 8.0 8.0 7.65481 5.490685 5.497325 7.22783 8.60464 7.58703 7.66424 5.466995 6.96374 7.35973 6.346025 7.18522 7.47685 6.99374 5.504175 6.53014 7.66295 6.09148 6.78951 6.75029 -0.03227 10.97752 5.15378 7.80823 4.610005 6.443605 4.371665 3.94538 5.83877 6.09513 5.94831 7.01098 7.15371 7.19565 8.0 8.47828 6.35302 8.05058 8.38419 9.509865 2.71993 3.34084 3.37329 6.39848 4.63978 4.92001 7.42273 4.26307 2.30103 5.41256 5.883065 5.50286 6.90164 5.305945 4.40909 6.30103 7.828645 8.0 9.637445 9.39814 8.42955 6.51686 9.60206 7.0 7.05661 5.424265 5.27445 4.67309 5.0 6.536875 7.351755 6.517305 7.5684 5.93626 5.839505 6.7754 5.91151 6.18609 4.559625 3.16562
6.65397 5.46823 4.30183 4.04707 4.239315 4.6618 4.4291 4.293095 4.55002 5.55292 3.32853 4.07922 4.677475 5.712955 4.914295 5.433415 4.37016 5.82013 3.462265 3.91659 4.33135 5.81819 4.81525 4.43267 6.343755 4.17905 4.09594 5.288685 5.85206 4.45406 5.56919 4.923445 2.815105 8.0 8.0 8.0 8.0 8.0 8.12494 6.30275 5.84889 7.297715 7.42247 7.520845 7.70016 5.34536 6.69288 7.388325 6.95166 7.26399 7.46386 7.124235 5.76125 5.95054 8.03055 5.98014 6.5279 6.528365 -0.252295 10.45217 5.080795 7.81615 4.417425 6.61759 4.68442 3.71921 6.05805 6.174795 5.972545 5.22099 6.58496 8.0 8.0 8.461265 7.575035 7.86997 8.47891 9.62218 2.614085 3.44203 2.99364 5.89215 4.48689 4.523925 8.51986 6.11428 3.29871 5.59214 5.40708 4.9351 6.95128 4.995345 4.117165 4.85438 8.0 8.0 9.57381 9.211115 7.80326 6.46467 9.60206 7.0 7.713495 6.21224 6.3822 6.305565 7.54977 7.232835 8.691435 7.47314 8.52614 6.3641 7.44779 7.99207 6.47945 6.44154 5.50939 3.16351
6.48873 5.61831 4.18994 3.61027 3.93708 4.2431 3.98081 3.95497 4.43885 4.86167 3.0 3.75397 4.01741 5.32508 4.46843 4.93812 4.04345 5.363165 3.21913 3.56662 4.23809 4.79265 4.30761 3.73183 5.85122 4.053455 3.65687 4.6772 5.397505 3.880645 5.09747 4.324905 2.78954 7.835875 8.0 8.0 8.0 8.0 8.12494 5.51533 5.715375 6.92618 7.894225 7.28434 7.7491 5.35181 6.48301 7.49058 7.09832 7.40551 7.454515 7.21116 5.473435 6.4099 7.609245 6.344125 6.720035 6.795165 -0.64313 10.09409 4.85796 7.598925 4.62847 6.478625 3.81391 2.78076 5.6732 4.08095 4.09654 6.65365 6.35921 5.69915 7.69462 7.6663 6.59973 5.0 7.0 7.68411 2.0 2.75592 2.34989 4.2853 4.69032 5.50398 5.0 3.943585 2.314675 3.84429 5.36635 4.923625 5.94367 6.12219 4.273235 6.30103 7.49136 7.81179 9.241215 8.6299 7.967225 6.14242 9.15317 7.0 7.30643 5.33702 5.481415 5.30856 6.623465 5.62906 6.21709 6.55464 7.48713 5.89586 6.463115 7.513785 5.621665 5.57352 4.85704 3.15291
6.372685 5.80833 4.22387 3.45249 4.04251 4.398775 4.340585 4.126415 4.41488 4.8975 3.38785 3.98431 4.151545 5.50978 4.56995 4.835575 4.34864 5.354975 3.36151 3.93722 3.97704 4.874865 4.43498 3.903105 6.061035 4.11617 3.60356 4.90786 5.242695 3.98424 5.253375 4.56507 2.77203 7.46352 7.91538 7.905465 7.968995 8.0 7.85439 5.97095 5.66108 6.52452 7.73825 6.94438 7.12534 5.25778 6.33704 7.513375 7.22888 7.05513 7.2712 7.03994 5.133245 6.208145 7.90948 6.12376 6.24627 6.531105 -0.81817 10.637765 4.886695 7.87992 4.30103 6.474365 4.533675 3.36282 5.67486 5.419325 5.905835 4.0 4.6809 5.15123 5.844125 7.0 6.034465 7.10671 7.0 6.7433 2.0 3.079695 2.47365 4.504225 3.03125 3.30103 7.27622 3.74457 2.30103 5.05263 4.78846 4.385565 4.095465 4.13303 2.14318 3.995415 8.0 8.0 9.53097 9.415965 8.35101 6.09998 9.60206 7.0 8.20873 5.5886 6.29532 6.83448 7.015485 7.25625 9.0 7.22648 6.39574 6.11515 6.87259 7.723665 6.29445 5.5604 4.77045 3.21139
6.44383 5.82612 4.26858 3.779565 4.13982 4.44135 4.33093 4.27169 4.51967 5.11878 3.29419 4.171085 4.38379 5.62449 4.66285 5.24711 4.47651 5.57458 3.40326 3.71468 4.58348 5.56341 4.57577 3.992135 6.45612 4.23056 3.656265 5.294365 5.79523 4.22418 5.40834 4.82041 3.004655 8.0 8.0 8.0 8.0 8.0 8.12494 6.26776 6.15162 7.2369 7.92964 7.588245 7.91869 5.38993 6.79451 7.84972 7.15279 7.57692 7.65327 7.27969 5.7157 6.42039 7.98727 6.23615 6.78019 6.76567 0.02818 10.628135 4.93798 7.79526 4.870335 6.69896 4.58363 3.50701 6.02682 5.04798 5.3366 7.04764 7.35682 7.269165 8.0 7.843285 7.21896 7.30381 8.22849 9.288285 2.40585 3.22669 2.79036 5.672265 5.03438 5.44811 7.04903 4.31325 2.30103 4.9104 5.6124 5.65223 6.650105 6.16836 4.41944 6.07484 7.518225 8.0 9.40405 9.08609 8.23584 6.326195 9.60206 7.0 7.573635 5.75162 6.08248 5.78426 7.085375 6.86448 8.055935 7.15991 7.864615 6.44204 6.90302 8.06693 6.32852 5.65406 5.21116 3.120685
5.94757 5.31908 4.12606 2.90309 3.29994 4.18992 3.771795 3.605155 4.344315 5.45753 3.0 3.60206 3.92682 4.84675 4.32921 5.7353 3.82391 5.13024 3.38805 3.406405 4.57264 5.27258 4.37204 3.82311 5.69416 4.04283 3.60206 4.78155 6.26871 3.805635 4.83902 4.16649 2.76391 6.57351 6.30273 6.441905 6.09517 6.5703 6.49621 4.95075 4.846825 5.80618 6.55901 6.00808 6.404235 5.6807 5.52414 6.2529 7.21816 6.79955 6.96184 6.57343 4.59834 5.66535 6.632345 5.73355 6.38913 6.31496 -0.42062 9.74499 5.378 7.82507 4.62398 6.88037 3.81245 3.75874 6.17231 5.68949 5.78964 5.331685 6.06484 4.77665 6.0 7.11642 6.25555 6.23945 7.07734 8.49672 2.0 2.70479 2.0 4.25164 3.3125 3.30103 5.766145 5.12169 2.89025 5.38419 5.23901 4.58549 6.6854 4.589695 3.24 5.22392 8.0 8.0 9.83628 9.26606 8.0382 6.311795 9.60206 7.0 7.65835 5.99085 6.36278 6.17695 7.103215 7.352685 8.75 7.10433 7.885525 6.86818 6.943155 7.965565 7.09431 5.47619 4.97821 3.48028
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# type: category
# dimension: cline BR:MCF7 BR:MDA_MB_231 BR:HS578T BR:BT_549 BR:T47D CNS:SF_268 CNS:SF_295 CNS:SF_539 CNS:SNB_19 CNS:SNB_75 CNS:U251 CO:COLO205 CO:HCC_2998 CO:HCT_116 CO:HCT_15 CO:HT29 CO:KM12 CO:SW_620 LE:CCRF_CEM LE:HL_60 LE:K_562 LE:MOLT_4 LE:RPMI_8226 LE:SR ME:LOXIMVI ME:MALME_3M ME:M14 ME:SK_MEL_2 ME:SK_MEL_28 ME:SK_MEL_5 ME:UACC_257 ME:UACC_62 ME:MDA_MB_435 ME:MDA_N LC:A549 LC:EKVX LC:HOP_62 LC:HOP_92 LC:NCI_H226 LC:NCI_H322M LC:NCI_H460 LC:NCI_H522 OV:IGROV1 OV:OVCAR_3 OV:OVCAR_4 OV:OVCAR_5 OV:OVCAR_8 OV:SK_OV_3 OV:NCI_ADR_RES PR:PC_3 PR:DU_145 RE:786_0 RE:A498 RE:ACHN RE:CAKI_1 RE:RXF_393 RE:SN12C RE:TK_10 RE:UO_31
# dimension: _cancer BR CNS CO LE ME LC OV PR RE
# name: Y133g
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