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510 Commits

Author SHA1 Message Date
Arnar Flatberg 18f33decc7 Finnished the l-pls fdr 2007-09-21 13:16:40 +00:00
Arnar Flatberg 6698ebe932 Removed actiavtion in dimcontroller
opt. of compare func
2007-09-20 16:12:58 +00:00
Arnar Flatberg 41f93c5989 .... 2007-09-20 16:11:37 +00:00
Arnar Flatberg 7e9a0882f1 Updates 2007-09-20 16:10:40 +00:00
Arnar Flatberg d9e5398865 GO (id, description, definition, ontology) 2007-08-28 09:39:24 +00:00
Arnar Flatberg 16ed2fd9c9 u 2007-08-24 11:48:29 +00:00
Arnar Flatberg dc43830752 HS-entrez annotations 2007-08-24 09:15:16 +00:00
Arnar Flatberg 7dbf28f65d ... just lots of stuff 2007-08-24 09:14:24 +00:00
Arnar Flatberg 21b63b17e5 Fixed axis bug in barplot 2007-08-24 09:13:34 +00:00
Arnar Flatberg 7538710144 Enabled tree lines and set sensitivity on transforms 2007-08-24 09:12:52 +00:00
Arnar Flatberg fa4604dbe5 load dataset defaults to datadir 2007-08-22 14:05:51 +00:00
Arnar Flatberg 01ef4bdedd Added support for identifiers sorting, and selection 2007-08-22 13:41:04 +00:00
Arnar Flatberg ffe1ce6319 Fixed queries 2007-08-22 13:40:33 +00:00
Arnar Flatberg 6ba8c6eb67 ups 2007-08-21 10:31:09 +00:00
Arnar Flatberg e06eeb6d17 ups 2007-08-21 10:25:23 +00:00
Einar Ryeng 26ab6c3fe7 Added a "decimals" parameter to write_ftsv, so that datasets can be written
without full precision. Defaults to 7 digits after decimal point.
2007-08-16 10:02:54 +00:00
Arnar Flatberg a6af506ae0 The reduced Uma X, for use in Lpls 2007-08-16 09:46:33 +00:00
Arnar Flatberg fc91d17bdc The Uma affy, nci60 + drug data + tissue type 2007-08-16 09:17:07 +00:00
Arnar Flatberg d510e092e3 Added SAM and conditioned enrichment analysis 2007-08-14 16:16:31 +00:00
Arnar Flatberg 8d4848d5fa Added explained variance 2007-08-14 16:12:28 +00:00
Arnar Flatberg 004cfe0a9f Quick fix for gray on NaNs 2007-08-14 16:10:35 +00:00
Einar Ryeng 13b35180ee Fixed bug in DAG plot color mapping. 2007-08-08 12:24:14 +00:00
Einar Ryeng e08dba0924 read_ftsv and write_ftsv now supports filenames as well as file descriptors. 2007-08-08 12:23:45 +00:00
Einar Ryeng 04126e9c83 New information content datasets. 2007-08-08 10:13:05 +00:00
Arnar Flatberg 46c2a0c149 New calculations (Z), based on updated X data 2007-08-07 11:45:16 +00:00
Arnar Flatberg 916fc4c046 Added scaling to navigator menu, moved transformations to a separate sub menu 2007-08-07 11:42:07 +00:00
Arnar Flatberg 168384f266 Cleaned esvd routine, added subfunc scale 2007-08-07 11:41:03 +00:00
Arnar Flatberg d055a1f882 Some ..... 2007-08-07 11:39:16 +00:00
Einar Ryeng 4b80baf225 Added information content drag'n'drop to z loadings plot. 2007-08-06 16:20:39 +00:00
Arnar Flatberg 72e300c95e Addded automatic bin selection in histogram plot 2007-08-04 10:37:22 +00:00
Einar Ryeng 3f7215bc35 Factored out a mixin class for IC thresholding. 2007-08-03 12:09:17 +00:00
Arnar Flatberg 0523ebab05 Added dataset transpose option 2007-08-03 09:44:31 +00:00
Arnar Flatberg e62a6ae9b3 Removed print statements 2007-08-02 14:51:53 +00:00
Arnar Flatberg 0758ab8bfb Fixed histogram plot to accept selections of one, and made ad-hoc choice of proportional color to patches 2007-08-02 14:37:19 +00:00
Arnar Flatberg 7a0e2481eb Full corrected X data 2007-08-02 11:22:05 +00:00
Einar Ryeng 94f4b276b9 Fixed selection in DAG-plot to work both with and without IC set. 2007-08-02 11:20:30 +00:00
Arnar Flatberg b334e94b15 New and corrected smokers data 2007-08-02 11:19:47 +00:00
Arnar Flatberg 438e7cb918 Irrelevant play 2007-08-02 11:19:16 +00:00
Arnar Flatberg 2d419a9862 Added GO-category enrichment analysis 2007-08-02 11:18:48 +00:00
Arnar Flatberg 973470b595 stuff 2007-08-02 11:18:18 +00:00
Einar Ryeng da5b977042 Moved less important datasets into a subfolder named "secondary". 2007-08-02 10:52:58 +00:00
Arnar Flatberg 83d76eac4f Fixed vorrect namespace for scipy funcs 2007-08-02 10:44:06 +00:00
Einar Ryeng b233e4abc6 Added spin buttons for minimum and maximum information content in DAG plot. 2007-08-02 10:20:33 +00:00
Arnar Flatberg dc3893eecc Fixed a "main.project" bug 2007-08-02 10:19:16 +00:00
Einar Ryeng f12fe23c1b Fixed docstrings. 2007-08-02 10:08:52 +00:00
Einar Ryeng 4c24061575 Fixed docstrings. 2007-08-02 10:08:27 +00:00
Einar Ryeng 63d6347f37 Fixed makefile to not use lots of space on inherited function documentation. 2007-08-02 10:04:06 +00:00
Einar Ryeng 6e4db7ebe4 Fixed plot focus signal problem. 2007-07-31 12:25:56 +00:00
Arnar Flatberg 10eba079bc iii 2007-07-30 18:04:42 +00:00
Einar Ryeng aa4007e208 Improved drag'n'drop of data into scatter plots so that it no longer requires
matching identifiers along dimensions.
2007-07-30 17:42:48 +00:00