3ee8439e07
Added selection listeners to plots in context menu
2007-02-26 07:58:33 +00:00
a614908436
Size of current selection is now updated in details
2007-02-23 11:12:03 +00:00
41e8ed511b
Fixed dim_cursor_changed to to use the correct treemodel, and added show/hide on selection details
2007-02-23 10:46:04 +00:00
0d8702bb71
added show/hide on dimensions
2007-02-21 19:57:27 +00:00
2bae169f38
Annotation display now works (sort of).
2007-02-21 16:39:04 +00:00
28aca8c621
added project to selection controller
2007-02-21 13:57:48 +00:00
8c03338b75
hypergeometric test (scipy version has errors)
2007-02-21 13:03:51 +00:00
48165d1aed
Updated the selection controller with sorting ++
2007-02-21 12:41:37 +00:00
f0b2660813
Selection listeners are now notified when new dimensions are added (because
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this implies that an empty selection is made on the new dimension).
2007-02-21 12:05:08 +00:00
5800e7e362
Fixed a bug that prevented the first selection on a dimension to come from a
...
dataset.
2007-02-21 11:49:43 +00:00
a5955f9b59
Now updates the DimListConroller when a CategoryDataset is drag'n'dropped into
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SelectionListController.
2007-02-21 11:43:00 +00:00
c5c4f13a19
Fixed some excessively long lines.
2007-02-21 11:08:20 +00:00
2cc4e86b0a
Split selections.py into three different controller classes, one for each list. There
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is still some work to be done, and bugs to be fixed.
2007-02-21 00:00:26 +00:00
a2195bcb4b
Added Import annotations option.
2007-02-16 11:23:29 +00:00
93a2f404d2
Data needed if annotationtest should run clean.
2007-02-15 23:09:49 +00:00
6809c1a454
Added some annotation support in selections.py, including the beginning of a
...
menu option to add an arbitrary annotation alongside identifiers.
2007-02-15 22:57:40 +00:00
953662e1fb
Added a couple of more assertions to the test of read_annotations_file()
2007-02-15 22:54:08 +00:00
e6cf8f765a
Added read_annotations_file()
2007-02-15 22:49:40 +00:00
b17f04466b
Added read_annotations_file() which reads a tab delimited file containing
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annotations to identifiers along a dimension.
2007-02-15 22:42:55 +00:00
4319e8630e
fixed error in typechecking
2007-02-15 13:36:36 +00:00
fc33c2dbfc
factored out packer
2007-02-09 14:02:58 +00:00
15c89fb9b5
Factored out packer
...
A packer.py
2007-02-09 14:02:39 +00:00
7eb13b14cb
Removed resolution arg to Circle to avoid construction of a circlepolygon (deprecated)
2007-02-02 12:21:19 +00:00
320cd97512
Removed noise generating print statements.
2007-01-31 14:58:37 +00:00
75b66914fd
Fixed bug by removing hardcoded filename.
2007-01-31 14:56:43 +00:00
74cb30428c
Added annotations to identifiers, and converted the unused annotationtest.py to
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test the new module.
2007-01-31 14:19:23 +00:00
1863bfc564
Save plot enabled
2007-01-31 13:26:46 +00:00
a7c60ffe64
added venn diagram test plot
2007-01-31 13:03:27 +00:00
240b0a4a9f
New lasso icon
2007-01-31 13:02:25 +00:00
d1205ae67f
Removed colorbar
2007-01-31 13:01:09 +00:00
37feb1c25b
bugfix on P scale
2007-01-31 13:00:36 +00:00
2cfa3ca415
spin on a/o, colorbar on keypress
2007-01-31 12:59:21 +00:00
63be80aa92
pls options added
2007-01-31 12:03:11 +00:00
088f180b5d
Barplot, lots of changes in scatter, disabled modes, removed labels, bugfix on lasso
2007-01-31 12:02:11 +00:00
e716db3fd2
Added center option to validation, + naming updates
2007-01-31 11:59:23 +00:00
29509902df
bugfix on shape
2007-01-31 11:57:59 +00:00
8e607c7b1a
bugfixed scaling issues
2007-01-31 11:57:04 +00:00
f064b7134d
Removed scale option added pack
2007-01-31 11:56:28 +00:00
1d5929f14c
pls options glade file
2007-01-31 11:55:43 +00:00
ed2848beb3
Errors when identifers dont match shape, + whitespace
2007-01-31 11:54:54 +00:00
48bb47ec86
Bugfixed pca
2007-01-25 12:36:32 +00:00
aeb37cf4cd
Added supportp for tall X in PCA
2007-01-25 12:17:16 +00:00
fa3722600c
pca options glade file
2007-01-25 12:15:30 +00:00
61bfc236e6
Changed location of PCA options glade file.
2007-01-25 12:15:19 +00:00
7a204a3426
Added option page to option dialog
2007-01-25 12:10:18 +00:00
1c2c2c8895
Multiple lib changes
2007-01-25 11:58:10 +00:00
a65d79697f
Added Expand/Collapse menu choices to the GO browser context menu. This is
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particularly useful when searching for GO terms, because the gtk TreeView
widget does not do interactive search in collapsed parts of the tree.
2007-01-21 16:16:37 +00:00
e03cc4ed4c
Added a ScrolledWindow around the navigator.
2007-01-19 14:00:10 +00:00
7693f336ba
Added a singleton project in the project module, so that the current project is
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easily accessible from anywhere in the code. As there is only one project at
any given time this should not be a problem.
The Gene Ontology browser needed this to be able to set the selection without
passing the current project through several constructors.
Added a context menu in the GO browser that allows the user to select all GO
terms in the subgraph that starts on the current node.
2007-01-18 15:45:48 +00:00
f533344242
Added histogram in plot menu
2007-01-17 15:40:54 +00:00
