 Einar Ryeng
|
26ab6c3fe7
|
Added a "decimals" parameter to write_ftsv, so that datasets can be written
without full precision. Defaults to 7 digits after decimal point.
|
2007-08-16 10:02:54 +00:00 |
 Arnar Flatberg
|
a6af506ae0
|
The reduced Uma X, for use in Lpls
|
2007-08-16 09:46:33 +00:00 |
|
Arnar Flatberg
|
fc91d17bdc
|
The Uma affy, nci60 + drug data + tissue type
|
2007-08-16 09:17:07 +00:00 |
|
Arnar Flatberg
|
d510e092e3
|
Added SAM and conditioned enrichment analysis
|
2007-08-14 16:16:31 +00:00 |
|
Arnar Flatberg
|
8d4848d5fa
|
Added explained variance
|
2007-08-14 16:12:28 +00:00 |
|
Arnar Flatberg
|
004cfe0a9f
|
Quick fix for gray on NaNs
|
2007-08-14 16:10:35 +00:00 |
|
Einar Ryeng
|
13b35180ee
|
Fixed bug in DAG plot color mapping.
|
2007-08-08 12:24:14 +00:00 |
|
Einar Ryeng
|
e08dba0924
|
read_ftsv and write_ftsv now supports filenames as well as file descriptors.
|
2007-08-08 12:23:45 +00:00 |
|
Einar Ryeng
|
04126e9c83
|
New information content datasets.
|
2007-08-08 10:13:05 +00:00 |
|
Arnar Flatberg
|
46c2a0c149
|
New calculations (Z), based on updated X data
|
2007-08-07 11:45:16 +00:00 |
|
Arnar Flatberg
|
916fc4c046
|
Added scaling to navigator menu, moved transformations to a separate sub menu
|
2007-08-07 11:42:07 +00:00 |
|
Arnar Flatberg
|
168384f266
|
Cleaned esvd routine, added subfunc scale
|
2007-08-07 11:41:03 +00:00 |
|
Arnar Flatberg
|
d055a1f882
|
Some .....
|
2007-08-07 11:39:16 +00:00 |
|
Einar Ryeng
|
4b80baf225
|
Added information content drag'n'drop to z loadings plot.
|
2007-08-06 16:20:39 +00:00 |
|
Arnar Flatberg
|
72e300c95e
|
Addded automatic bin selection in histogram plot
|
2007-08-04 10:37:22 +00:00 |
|
Einar Ryeng
|
3f7215bc35
|
Factored out a mixin class for IC thresholding.
|
2007-08-03 12:09:17 +00:00 |
|
Arnar Flatberg
|
0523ebab05
|
Added dataset transpose option
|
2007-08-03 09:44:31 +00:00 |
|
Arnar Flatberg
|
e62a6ae9b3
|
Removed print statements
|
2007-08-02 14:51:53 +00:00 |
|
Arnar Flatberg
|
0758ab8bfb
|
Fixed histogram plot to accept selections of one, and made ad-hoc choice of proportional color to patches
|
2007-08-02 14:37:19 +00:00 |
|
Arnar Flatberg
|
7a0e2481eb
|
Full corrected X data
|
2007-08-02 11:22:05 +00:00 |
|
Einar Ryeng
|
94f4b276b9
|
Fixed selection in DAG-plot to work both with and without IC set.
|
2007-08-02 11:20:30 +00:00 |
|
Arnar Flatberg
|
b334e94b15
|
New and corrected smokers data
|
2007-08-02 11:19:47 +00:00 |
|
Arnar Flatberg
|
438e7cb918
|
Irrelevant play
|
2007-08-02 11:19:16 +00:00 |
|
Arnar Flatberg
|
2d419a9862
|
Added GO-category enrichment analysis
|
2007-08-02 11:18:48 +00:00 |
|
Arnar Flatberg
|
973470b595
|
stuff
|
2007-08-02 11:18:18 +00:00 |
|
Einar Ryeng
|
da5b977042
|
Moved less important datasets into a subfolder named "secondary".
|
2007-08-02 10:52:58 +00:00 |
|
Arnar Flatberg
|
83d76eac4f
|
Fixed vorrect namespace for scipy funcs
|
2007-08-02 10:44:06 +00:00 |
|
Einar Ryeng
|
b233e4abc6
|
Added spin buttons for minimum and maximum information content in DAG plot.
|
2007-08-02 10:20:33 +00:00 |
|
Arnar Flatberg
|
dc3893eecc
|
Fixed a "main.project" bug
|
2007-08-02 10:19:16 +00:00 |
|
Einar Ryeng
|
f12fe23c1b
|
Fixed docstrings.
|
2007-08-02 10:08:52 +00:00 |
|
Einar Ryeng
|
4c24061575
|
Fixed docstrings.
|
2007-08-02 10:08:27 +00:00 |
|
Einar Ryeng
|
63d6347f37
|
Fixed makefile to not use lots of space on inherited function documentation.
|
2007-08-02 10:04:06 +00:00 |
|
Einar Ryeng
|
6e4db7ebe4
|
Fixed plot focus signal problem.
|
2007-07-31 12:25:56 +00:00 |
|
Arnar Flatberg
|
10eba079bc
|
iii
|
2007-07-30 18:04:42 +00:00 |
|
Einar Ryeng
|
aa4007e208
|
Improved drag'n'drop of data into scatter plots so that it no longer requires
matching identifiers along dimensions.
|
2007-07-30 17:42:48 +00:00 |
|
Einar Ryeng
|
0bc4a6e3f0
|
Fixed drag'n'drop of datasets to DAG-plots to convert inf/-inf to
maximum/minimum values of the dataset.
|
2007-07-30 14:15:23 +00:00 |
|
Einar Ryeng
|
e84a202fbe
|
Commented out unused functions.
|
2007-07-30 10:51:58 +00:00 |
|
Arnar Flatberg
|
50a6dae3f6
|
added full lpls data
|
2007-07-30 10:21:09 +00:00 |
|
Arnar Flatberg
|
b39e71ca2b
|
Trying to fix cv_pls
|
2007-07-30 09:46:43 +00:00 |
|
Einar Ryeng
|
9ccdf97d07
|
Changed filenames of information content datasets.
|
2007-07-30 07:55:36 +00:00 |
|
Einar Ryeng
|
1e18ac81de
|
Added names to datasets.
|
2007-07-30 07:54:22 +00:00 |
|
Arnar Flatberg
|
349cab3c51
|
ups
|
2007-07-28 16:05:11 +00:00 |
|
Arnar Flatberg
|
9a2e259209
|
c
|
2007-07-28 09:19:42 +00:00 |
|
Arnar Flatberg
|
df88f44255
|
clean up
ups
|
2007-07-28 09:18:48 +00:00 |
|
Einar Ryeng
|
5cf34fc03f
|
Added information content datasets.
They are in files named ICs<subgraph><number> where
those numbered 0 uses all ECs while 5 uses only the safest ones.
|
2007-07-27 17:22:10 +00:00 |
|
Arnar Flatberg
|
4b8f594966
|
app -> main.application
|
2007-07-27 09:40:58 +00:00 |
|
Arnar Flatberg
|
47b89cc411
|
Fixed bug in esvd for m>n
|
2007-07-26 18:32:48 +00:00 |
|
Arnar Flatberg
|
7fd4ac6225
|
pls opt fix
|
2007-07-26 18:32:27 +00:00 |
|
Arnar Flatberg
|
b35f814ef0
|
Added center check button on lineview
|
2007-07-26 18:26:50 +00:00 |
|
Einar Ryeng
|
dc7f7dbde2
|
Added existing_identifiers function to Dataset.
Added colouring drag'n'drop to DAGPlot in gobrowser module.
|
2007-07-26 15:45:42 +00:00 |