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						f83a16ec37
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							Added new script.
						
						
						
						
						
						
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						2008-01-21 11:15:54 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						aef2e1daf0
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							Tralala ...
						
						
						
						
						
						
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						2007-11-07 12:34:13 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						7e9a0882f1
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							Updates
						
						
						
						
						
						
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						2007-09-20 16:10:40 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						6ba8c6eb67
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							ups
						
						
						
						
						
						
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						2007-08-21 10:31:09 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						e06eeb6d17
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							ups
						
						
						
						
						
						
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						2007-08-21 10:25:23 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						438e7cb918
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							Irrelevant play
						
						
						
						
						
						
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						2007-08-02 11:19:16 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						349cab3c51
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							ups
						
						
						
						
						
						
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						2007-07-28 16:05:11 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						91abf12f51
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							sd
						
						
						
						
						
						
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						2007-07-24 14:34:47 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						1d517d0754
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							Changed hardcoded absolute path to relative path.
						
						
						
						
						
						
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						2007-07-24 13:00:29 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						05274b4f0b
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							confidence
						
						
						
						
						
						
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						2007-07-23 18:07:10 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						155dfada5c
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							iups
						
						
						
						
						
						
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						2007-07-23 13:25:34 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						9db5991108
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						2007-07-20 15:48:59 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						98f53d3448
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							updates
						
						
						
						
						
						
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						2007-07-20 12:32:54 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						7ee7aa968a
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							Initial import
						
						
						
						
						
						
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						2007-07-20 09:36:26 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						c7bfefe358
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							Fixed resnik distances.
						
						
						
						
						
						
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						2007-05-15 18:16:07 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						335efe231a
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							go-gene-matrix takes a GO vs. GO distance matrix and a gene-go-mapping file
						
						
						
						
						
						
						
						and makes a gene vs. go distance matrix based on the shortest distances found
between each gene and go term. 
						
						
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						2007-05-15 18:15:51 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						f1301be67a
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							go-distance update.
						
						
						
						
						
						
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						2007-04-26 18:54:34 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						fefaffb2e3
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							go-distance seems to be able to calculate resnik now. Not asserted with
						
						
						
						
						
						
						
						calculations by hand. 
						
						
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						2007-04-04 19:08:50 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						28f0f53e8a
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							go-distance script soon calculating resnik distances.
						
						
						
						
						
						
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						2007-04-03 13:08:48 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						a5c3a1f154
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							A couple of extra lines of code in a script.
						
						
						
						
						
						
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						2007-03-27 13:02:22 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						728c334e8a
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							ontology distance script now accumulates annotations correctly.
						
						
						
						
						
						
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						2007-03-26 23:15:14 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						11eb3306b9
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							Works a bit better.
						
						
						
						
						
						
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						2007-03-26 17:18:26 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						947cf8385f
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							Annotations on yeast from Stanford mdb.
						
						
						
						
						
						
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						2007-03-23 20:51:04 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						0904a59310
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							Gene ontolgy distance script in C. Will hopefully speed up calculations when
						
						
						
						
						
						
						
						finished. 
						
						
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						2007-03-23 13:25:07 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						3dc1867be4
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							Added entrez-go-mapping that maps entrez IDs to GO terms based on a file of the form:
						
						
						
						
						
						
						
						affy_id ::: geneid_1 /// geneid_2 ::: go(bp) ::: go(cc) ::: go(mf) 
						
						
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						2007-03-15 23:47:24 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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						6fe4ff3c59
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							Added scripts folder for small but useful scripts.
						
						
						
						
						
						
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						2007-03-15 12:46:41 +00:00 | 
					
					
						
						
						
							
							
							
							
							
							
							
							
						
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