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154 Commits

Author SHA1 Message Date
Einar Ryeng 5c45308279 Double clicking a function in the navigator causes the first four plots of that 
function to be displayed in the main view. If the function has returned less
than four plots the remaining ViewFrames will be cleared.
 2006-08-31 10:57:44 +00:00
Arnar Flatberg 0b58c5ea28 Switch to numpy (scipy_version>1.0) changes 2006-08-31 10:04:19 +00:00
Einar Ryeng a0786d521a Removed SinePlot from the test workflow. 2006-08-30 14:38:33 +00:00
Einar Ryeng 0d8edc91ca Identifier lists are now sorted, and there is no active list when a row is selected. 2006-08-30 13:56:54 +00:00
Arnar Flatberg a670fc6b61 cleaning up 2006-08-30 13:39:32 +00:00
Arnar Flatberg fc2891bad8 removed SinePlot and and added general selection sensitive function thingy 2006-08-30 13:21:08 +00:00
Arnar Flatberg b000792faa Added method: as_selections() to CategoryDataset 2006-08-30 12:37:08 +00:00
Einar Ryeng 026dc639e3 Selections are selected when a row is activated. Identifiers are updated when cursor-changed is called. 2006-08-30 11:36:30 +00:00
Arnar Flatberg fc21c58ab3 Added icons to navigator 2006-08-30 10:27:45 +00:00
Einar Ryeng 1b9aff1c5a The selection view now works. Functions can return a dataset.Selection object which will be stored in the selection list. 2006-08-29 23:57:21 +00:00
Arnar Flatberg ae7a6a5a0e Added extended toolbar with selection freeze 2006-08-29 09:03:28 +00:00
Arnar Flatberg 97e652edce fixes 2006-08-28 12:06:05 +00:00
Arnar Flatberg 7eb3fa8b46 Fixed dataset placement in navigator 2006-08-27 14:12:37 +00:00
Arnar Flatberg edd7d47cf1 Added regular scatterplot with size and color options 2006-08-14 16:19:51 +00:00
Arnar Flatberg a5c5987fc3 updated Lineview and Plot 2006-08-14 15:01:34 +00:00
Arnar Flatberg fc8b2e601f update 2006-08-14 11:52:26 +00:00
Arnar Flatberg 8016d732d2 Added LineViewPLot and renamed ScatterPlot to ScatterMarkerPlot 2006-08-14 09:26:54 +00:00
Arnar Flatberg b14dc3c9c2 Added from_file and to_file 2006-08-13 11:35:12 +00:00
Einar Ryeng 06905934db Fixed update bug. The list of currently selected elements is now automatically updated from selection_changed(). 2006-08-09 14:35:42 +00:00
Arnar Flatberg 2e2fa85727 removed message, removed draw from release_select, added view limits update in scatterplot 2006-08-09 08:02:38 +00:00
Arnar Flatberg e846a83cb8 removed toolbar message on select 2006-08-08 14:37:31 +00:00
Arnar Flatberg 25f102bafd removed ac.xlear() 2006-08-08 11:09:59 +00:00
Arnar Flatberg 9d0e088ced get_dim_names -> get_dim_name 2006-08-08 10:34:15 +00:00
Einar Ryeng 150441ef0f Forgot to check in selections.py in last commit. 2006-08-08 08:48:55 +00:00
Arnar Flatberg bbd525bed0 Added reversedict and updated get_dentifiers and get_indices 2006-08-08 08:05:26 +00:00
Arnar Flatberg 677d368b60 Added category dataset 2006-08-08 07:54:00 +00:00
Einar Ryeng b769288b3b Added a selection view tab, placed next to the "Log" tab. The tab currently 
only displays the current selection.
 2006-08-07 14:14:42 +00:00
Einar Ryeng 57cb203316 Closes #14 2006-08-04 09:32:11 +00:00
Einar Ryeng 4c716e9428 NetworkPlot now works, but does not allow node colors or sizes to be passed as keyword arguments. 2006-08-03 14:30:06 +00:00
Einar Ryeng 44b676f726 system/plots.py: Fixed a few bugs in NetworkPlot. 2006-08-01 14:26:33 +00:00
Einar Ryeng b3d681ef16 * system/plots.py: Added NetworkPlot, which may or may not work correctly. 
* system/dataset.py: Removed a few lines of obsolete code.
 2006-08-01 13:22:39 +00:00
Arnar Flatberg 37b4d55a86 2006-08-01 11:01:52 +00:00
Arnar Flatberg a55a872399 fix output for indices is empty array 2006-08-01 10:53:44 +00:00
Arnar Flatberg 27472defda bugfix in get_identifiers 2006-08-01 10:33:45 +00:00
Arnar Flatberg 676ea4e0b9 removed shape in constructor, added all_dims to dataset base class, updated get_identifiers and get_indices 
Denne linjen og de som er under vil bli ignorert--

M    dataset.py
 2006-08-01 09:45:53 +00:00
Einar Ryeng 61da4f562e Added LICENCE (the pure GPL text copied verbatim from gnu.org) and README. 
Started to add a NetworkX plot in plots.py
 2006-07-31 14:57:24 +00:00
Einar Ryeng 87f87e36c8 * system/fluents.py: Fixed a bug where the the application tried to load 
a toolbar from None

 * system/plots.py: Fixed MainView.insert_view that was a no-op when in large
   view.

 * system/dataset.py: Changed __str__ of dataset to also show names of dimensions.
 2006-07-21 14:30:09 +00:00
Einar Ryeng aca9a47f56 Toolbars work again. 2006-06-01 13:51:16 +00:00
Einar Ryeng 0670c42bd4 Drag and drop from the navigator to the viewframes now work. 2006-05-29 19:14:48 +00:00
Einar Ryeng 581cef75ae Fixed plot things. A plot can only be attached to one view now. 2006-05-29 11:24:33 +00:00
Einar Ryeng 62c1d79dac Fixed large/small plot bug by adding ViewFrames that contains plots. 2006-05-22 21:43:24 +00:00
Truls Alexander Tangstad 9ab1ebe687 Small cleanup. 2006-05-09 14:16:22 +00:00
Truls Alexander Tangstad 443b18cea6 Made sure ordering of matrices are ok. 2006-05-09 14:13:09 +00:00
Truls Alexander Tangstad 86f89b6ffe Typo. 2006-05-09 13:51:14 +00:00
Truls Alexander Tangstad 5b1af849dc Implemented Limma function for Affy workflow. 
Extended ScatterPlot to take two datasets and updated code using it.
 2006-05-09 13:17:17 +00:00
Reidar Strand Hagen 033d4d5333 removed reorderability 2006-05-09 13:00:16 +00:00
Reidar Strand Hagen 184a49ef9a fixed ordering of multiple selected datasets 2006-05-09 12:22:50 +00:00
Truls Alexander Tangstad 0db25f1dd7 Changed use of Dataset.get_matrix() to Dataset.asarray() and removed it. 2006-05-05 14:43:53 +00:00
Truls Alexander Tangstad 97f56f66ac Added text-input for contrast-matrix creator for affymetrics workflow. 2006-05-05 14:30:23 +00:00
Truls Alexander Tangstad 98445498b5 If argument 'selection' exists in function.run, pass current selection to it. 2006-05-05 13:10:54 +00:00