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146 Commits

Author SHA1 Message Date
Arnar Flatberg e62a6ae9b3 Removed print statements 2007-08-02 14:51:53 +00:00
Arnar Flatberg 0758ab8bfb Fixed histogram plot to accept selections of one, and made ad-hoc choice of proportional color to patches 2007-08-02 14:37:19 +00:00
Arnar Flatberg 973470b595 stuff 2007-08-02 11:18:18 +00:00
Arnar Flatberg 83d76eac4f Fixed vorrect namespace for scipy funcs 2007-08-02 10:44:06 +00:00
Arnar Flatberg dc3893eecc Fixed a "main.project" bug 2007-08-02 10:19:16 +00:00
Einar Ryeng f12fe23c1b Fixed docstrings. 2007-08-02 10:08:52 +00:00
Einar Ryeng 4c24061575 Fixed docstrings. 2007-08-02 10:08:27 +00:00
Einar Ryeng 6e4db7ebe4 Fixed plot focus signal problem. 2007-07-31 12:25:56 +00:00
Arnar Flatberg 10eba079bc iii 2007-07-30 18:04:42 +00:00
Einar Ryeng aa4007e208 Improved drag'n'drop of data into scatter plots so that it no longer requires
matching identifiers along dimensions.
2007-07-30 17:42:48 +00:00
Arnar Flatberg b39e71ca2b Trying to fix cv_pls 2007-07-30 09:46:43 +00:00
Arnar Flatberg 349cab3c51 ups 2007-07-28 16:05:11 +00:00
Arnar Flatberg 9a2e259209 c 2007-07-28 09:19:42 +00:00
Arnar Flatberg df88f44255 clean up
ups
2007-07-28 09:18:48 +00:00
Arnar Flatberg 4b8f594966 app -> main.application 2007-07-27 09:40:58 +00:00
Arnar Flatberg 47b89cc411 Fixed bug in esvd for m>n 2007-07-26 18:32:48 +00:00
Arnar Flatberg 7fd4ac6225 pls opt fix 2007-07-26 18:32:27 +00:00
Arnar Flatberg b35f814ef0 Added center check button on lineview 2007-07-26 18:26:50 +00:00
Einar Ryeng dc7f7dbde2 Added existing_identifiers function to Dataset.
Added colouring drag'n'drop to DAGPlot in gobrowser module.
2007-07-26 15:45:42 +00:00
Einar Ryeng a45743c31e Added main.py that now contains the One & Only Singleton instance of these classes:
- Navigator
 - Aplication
 - Workflow
 - Project
 - Options
Corresponding changes have been added in lots of other files to account for this, but
the access to these objects should now be a lot easier.
2007-07-26 12:35:59 +00:00
Einar Ryeng 524c90fcf7 Updated to handle new numpy/scipy. 2007-07-24 12:19:13 +00:00
Arnar Flatberg 05274b4f0b confidence 2007-07-23 18:07:10 +00:00
Arnar Flatberg a05d0faa0d Lib updates 2007-07-23 17:33:21 +00:00
Einar Ryeng a503ffcdf8 Fixed linewidth in selection in scatter plots. 2007-07-05 11:57:21 +00:00
Einar Ryeng d29013a863 T-test now works, and outputs a histogram as well as t-values and p-values. 2007-07-03 16:25:38 +00:00
Einar Ryeng 99987999db Broke up a too long line. 2007-07-02 09:54:56 +00:00
Einar Ryeng 4eaea2fe59 Added empty lists as default values for all_data and all_plots in Options, so
that subclasses of Options will work with the GUI without modifications.
2007-06-28 21:33:09 +00:00
Einar Ryeng 68cc583d2c Added common_dimensions(ds) that lists common dimensions between two
datasets.
2007-06-22 15:35:45 +00:00
Einar Ryeng ff2c42902f Commented out some log lines that just cluttered the log. 2007-06-21 10:25:17 +00:00
Arnar Flatberg ebe7621817 some biocondoctur utilities 2007-05-06 13:51:06 +00:00
Arnar Flatberg a0faed2614 Forgot some ... 2007-04-24 17:21:40 +00:00
Arnar Flatberg 34ae426c86 Added correlation plot and moved colorbar to plots 2007-04-24 17:17:31 +00:00
Arnar Flatberg 90bb25eb55 added default mappable to None 2007-04-24 17:16:34 +00:00
Arnar Flatberg 31ac569c3e Added colorbar shortcut 2007-04-24 17:04:29 +00:00
Arnar Flatberg b02773b4e6 pls loading plot now have correct name 2007-03-15 10:38:52 +00:00
Einar Ryeng 1c48315a0f Added debug output. 2007-03-14 17:26:40 +00:00
Arnar Flatberg 438a268b1d Inserted visible header sort 2007-03-14 16:34:50 +00:00
Arnar Flatberg 3d2492578e whitespace 2007-03-14 16:33:54 +00:00
Arnar Flatberg 3bd21ab089 metric support 2007-03-14 16:33:16 +00:00
Arnar Flatberg 48047f1395 Moved lots of stuff back to sandbox 2007-03-14 16:32:49 +00:00
Arnar Flatberg 7f1f639ee7 Updates on metric, whitespace 2007-03-14 16:31:25 +00:00
Arnar Flatberg 22f6e3284c whitespace 2007-03-14 16:30:18 +00:00
Arnar Flatberg 818dc0b2b0 added a logger for constructor calls 2007-03-14 16:27:23 +00:00
Arnar Flatberg 212da78933 correct comp update 2007-03-14 16:17:21 +00:00
Arnar Flatberg 00dd3e8d9d added validation on identifiers input 2007-03-14 16:06:16 +00:00
Arnar Flatberg 9cbefb5705 in write_ftsv: adjusted so it splits specifically on tab, whitespace allowed in annotations 2007-03-14 10:24:49 +00:00
Einar Ryeng 28e6c52f78 Fixed bug with hidden dimensions. 2007-03-01 15:06:33 +00:00
Arnar Flatberg d699afa6a5 fixed bu when trying to drag anything over an empty view 2007-03-01 15:03:53 +00:00
Einar Ryeng 6101bf850c Changed CategoryDataset ftsv files to be written with 0 and 1 instead of True and False. 2007-02-28 16:33:11 +00:00
Einar Ryeng 89636962a7 Added Workflow.get_data_file_name() which returns the full path to a given
data file, or None if the file does not exist. This is tested in the test
workflow.
2007-02-28 14:56:24 +00:00