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A lightweight, interactive data analysis program for bilinear modeling (PCA and PLS)
This repository has been archived on 2024-07-04. You can view files and clone it, but cannot push or open issues or pull requests.
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Python 97%
C 1.7%
R 1.1%
M4 0.1%
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Einar Ryeng 256133275c * Changed build behaviour to suit newer Ubuntu releases (at least 9.10). 
* Added -c option to generate intial configuration file and directories. This will create
  the file ~/.laydi and the directories ~/laydi/datasets and ~/laydi/workflows.
* Removed debug print statements.
 		2010-01-19 16:45:51 +00:00
bin * Changed build behaviour to suit newer Ubuntu releases (at least 9.10). 2010-01-19 16:45:51 +00:00
debian * Changed build behaviour to suit newer Ubuntu releases (at least 9.10). 2010-01-19 16:45:51 +00:00
doc Fixing the colours of the overview image. 2008-12-06 14:37:10 +00:00
icons FIXING STUFF! 2008-12-05 22:07:56 +00:00
laydi * Changed build behaviour to suit newer Ubuntu releases (at least 9.10). 2010-01-19 16:45:51 +00:00
scripts FIXING STUFF! 2008-12-05 22:07:56 +00:00
test FIXING STUFF! 2008-12-05 22:07:56 +00:00
workflows Smokers workflow automatically loads annotations on the go-terms and gene_ids dimensions. 2009-02-06 23:48:25 +00:00
LICENSE Removed some example rubbish that was placed after the GPL and had gotten 2006-10-17 17:17:50 +00:00
Makefile.m4 FIXING STUFF! 2008-12-05 22:07:56 +00:00
README Fixed description to run laydi after checkout. 2009-11-19 21:58:07 +00:00
configure * Changed build behaviour to suit newer Ubuntu releases (at least 9.10). 2010-01-19 16:45:51 +00:00
matplotlibrc Fixed warning about deprecated matplotlib setting. 2009-08-22 20:11:48 +00:00
run-laydi FIXING STUFF! 2008-12-05 22:07:56 +00:00
setup.py FIXING STUFF! 2008-12-05 22:07:56 +00:00

README 

Laydi Data Analysis Software

LICENSE
-------
Laydi is relased under the terms of the GNU GPL, included in the LICENSE file
in this directory.

DOCUMENTATION
-------------
The primary and canonical source of documentation is the source code. If a
keyboard shortcut is listed on the wiki but it does not work in the program,
the program is right, and the wiki is wrong.

That said, the next best place to look for documentation is the project wiki,
located at https://dev.pvv.ntnu.no/projects/laydi/help

Class documentation is in HTML form in the doc/ directory.

BUILDING
--------
Laydi is a python program, and as such, python will build compiled versions
of each .py file as it loads them. You do not need to explicitly compile the
program.

If you have just checked out the program to a directory named laydi, e.g. with
the command:

svn co https://dev.pvv.org/svn/projects/laydi/trunk laydi

you can run it by typing:

cd laydi
./configure --prefix=`pwd`/build
make
./run-laydi

TODO
----
The current TODO list can be found on
https://dev.pvv.ntnu.no/projects/laydi/report/1