Arnar Flatberg
4b8f594966
app -> main.application
2007-07-27 09:40:58 +00:00
Arnar Flatberg
47b89cc411
Fixed bug in esvd for m>n
2007-07-26 18:32:48 +00:00
Arnar Flatberg
7fd4ac6225
pls opt fix
2007-07-26 18:32:27 +00:00
Arnar Flatberg
b35f814ef0
Added center check button on lineview
2007-07-26 18:26:50 +00:00
Einar Ryeng
dc7f7dbde2
Added existing_identifiers function to Dataset.
...
Added colouring drag'n'drop to DAGPlot in gobrowser module.
2007-07-26 15:45:42 +00:00
Einar Ryeng
a45743c31e
Added main.py that now contains the One & Only Singleton instance of these classes:
...
- Navigator
- Aplication
- Workflow
- Project
- Options
Corresponding changes have been added in lots of other files to account for this, but
the access to these objects should now be a lot easier.
2007-07-26 12:35:59 +00:00
Einar Ryeng
524c90fcf7
Updated to handle new numpy/scipy.
2007-07-24 12:19:13 +00:00
Arnar Flatberg
05274b4f0b
confidence
2007-07-23 18:07:10 +00:00
Arnar Flatberg
a05d0faa0d
Lib updates
2007-07-23 17:33:21 +00:00
Einar Ryeng
a503ffcdf8
Fixed linewidth in selection in scatter plots.
2007-07-05 11:57:21 +00:00
Einar Ryeng
d29013a863
T-test now works, and outputs a histogram as well as t-values and p-values.
2007-07-03 16:25:38 +00:00
Einar Ryeng
99987999db
Broke up a too long line.
2007-07-02 09:54:56 +00:00
Einar Ryeng
4eaea2fe59
Added empty lists as default values for all_data and all_plots in Options, so
...
that subclasses of Options will work with the GUI without modifications.
2007-06-28 21:33:09 +00:00
Einar Ryeng
68cc583d2c
Added common_dimensions(ds) that lists common dimensions between two
...
datasets.
2007-06-22 15:35:45 +00:00
Einar Ryeng
ff2c42902f
Commented out some log lines that just cluttered the log.
2007-06-21 10:25:17 +00:00
Arnar Flatberg
ebe7621817
some biocondoctur utilities
2007-05-06 13:51:06 +00:00
Arnar Flatberg
a0faed2614
Forgot some ...
2007-04-24 17:21:40 +00:00
Arnar Flatberg
34ae426c86
Added correlation plot and moved colorbar to plots
2007-04-24 17:17:31 +00:00
Arnar Flatberg
90bb25eb55
added default mappable to None
2007-04-24 17:16:34 +00:00
Arnar Flatberg
31ac569c3e
Added colorbar shortcut
2007-04-24 17:04:29 +00:00
Arnar Flatberg
b02773b4e6
pls loading plot now have correct name
2007-03-15 10:38:52 +00:00
Einar Ryeng
1c48315a0f
Added debug output.
2007-03-14 17:26:40 +00:00
Arnar Flatberg
438a268b1d
Inserted visible header sort
2007-03-14 16:34:50 +00:00
Arnar Flatberg
3d2492578e
whitespace
2007-03-14 16:33:54 +00:00
Arnar Flatberg
3bd21ab089
metric support
2007-03-14 16:33:16 +00:00
Arnar Flatberg
48047f1395
Moved lots of stuff back to sandbox
2007-03-14 16:32:49 +00:00
Arnar Flatberg
7f1f639ee7
Updates on metric, whitespace
2007-03-14 16:31:25 +00:00
Arnar Flatberg
22f6e3284c
whitespace
2007-03-14 16:30:18 +00:00
Arnar Flatberg
818dc0b2b0
added a logger for constructor calls
2007-03-14 16:27:23 +00:00
Arnar Flatberg
212da78933
correct comp update
2007-03-14 16:17:21 +00:00
Arnar Flatberg
00dd3e8d9d
added validation on identifiers input
2007-03-14 16:06:16 +00:00
Arnar Flatberg
9cbefb5705
in write_ftsv: adjusted so it splits specifically on tab, whitespace allowed in annotations
2007-03-14 10:24:49 +00:00
Einar Ryeng
28e6c52f78
Fixed bug with hidden dimensions.
2007-03-01 15:06:33 +00:00
Arnar Flatberg
d699afa6a5
fixed bu when trying to drag anything over an empty view
2007-03-01 15:03:53 +00:00
Einar Ryeng
6101bf850c
Changed CategoryDataset ftsv files to be written with 0 and 1 instead of True and False.
2007-02-28 16:33:11 +00:00
Einar Ryeng
89636962a7
Added Workflow.get_data_file_name() which returns the full path to a given
...
data file, or None if the file does not exist. This is tested in the test
workflow.
2007-02-28 14:56:24 +00:00
Arnar Flatberg
281337251d
Added selection of lines in network plot
2007-02-27 21:19:24 +00:00
Arnar Flatberg
78183df0e9
Alignment of function boxes
2007-02-27 18:14:58 +00:00
Arnar Flatberg
b754a5df44
Update from change of plots/view
2007-02-27 16:31:18 +00:00
Arnar Flatberg
61cfd00558
Division of plots -> view/plots
2007-02-27 16:28:03 +00:00
Arnar Flatberg
059cddbc16
Division of plots -> view/plots
2007-02-27 16:27:39 +00:00
Arnar Flatberg
686a1fdcd1
network/venn plot now maximizes the space available
2007-02-27 15:42:27 +00:00
Arnar Flatberg
d27278241c
oops ... (broken code fixed)
2007-02-27 15:08:00 +00:00
Arnar Flatberg
4de65f1085
Clean up
2007-02-27 15:05:21 +00:00
Einar Ryeng
f73a6db0ee
Added ctrl+arrows to navigate between plots.
2007-02-26 23:00:25 +00:00
Einar Ryeng
eacb44f32a
Removed "Edit" menu.
2007-02-26 22:12:32 +00:00
Einar Ryeng
d040f11c2f
Added identifier list update on selection changed.
2007-02-26 18:02:34 +00:00
Einar Ryeng
537dc9f0ec
Cleanup of selection browser module. Added comments, fixed some bits of code.
2007-02-26 14:35:31 +00:00
Arnar Flatberg
c0bbe24c39
No selections in scatter marker now updates to no selection instead of last selection
2007-02-26 12:11:28 +00:00
Arnar Flatberg
a6fbef9cfa
scatter plot selected markers are now on top (visible)
2007-02-26 11:20:02 +00:00
Arnar Flatberg
Einar Ryeng