Created new workflow for showing information about a dataset as a view.
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@ -17,6 +17,7 @@ class EinarsWorkflow (Workflow):
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load = Stage('load', 'Load Data')
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load.add_function(Function('load', 'Load Microarrays'))
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load.add_function(TestDataFunction())
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load.add_function(DatasetInfoFunction())
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self.add_stage(load)
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preproc = Stage('preprocess', 'Preprocessing')
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@ -99,3 +100,37 @@ class TestDataFunction(Function):
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X = dataset.Dataset(x,[axis_0,axis_1])
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return [X]
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class DatasetInfoFunction(Function):
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def __init__(self):
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Function.__init__(self, 'data_info', 'Show information')
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def run(self, data):
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if data:
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logger.log('notice', 'Generating view for %s.' % data.get_name())
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return [DatasetInfoView(data)]
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else:
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logger.log('notice', 'Not generating view... no data.')
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return []
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class DatasetInfoView(plots.Plot):
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def __init__(self, data):
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plots.Plot.__init__(self, None)
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buf = gtk.TextBuffer()
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buf_iter = buf.get_start_iter()
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buf.insert(buf_iter, "Data: %s\n\n" % data.get_name())
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buf.insert(buf_iter, "Dimensions: ")
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dims = []
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for name in data.get_dim_names():
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dims.append((name, data.dims[data._dim_num[name]]))
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buf.insert(buf_iter, ", ".join(["%s (%d)" % dim for dim in dims]))
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area = gtk.TextView(buf)
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area.connect('button_press_event', self.on_button_press)
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area.set_editable(False)
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self.add(area)
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area.show()
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