 Einar Ryeng
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b17f04466b
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Added read_annotations_file() which reads a tab delimited file containing
annotations to identifiers along a dimension.
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2007-02-15 22:42:55 +00:00 |
|
Einar Ryeng
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74cb30428c
|
Added annotations to identifiers, and converted the unused annotationtest.py to
test the new module.
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2007-01-31 14:19:23 +00:00 |
|
Einar Ryeng
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cdb8d1b026
|
Removed unit test for workflows. The only test file in the directory is
for a workflow that is not used.
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2006-10-17 17:53:52 +00:00 |
 Truls Alexander Tangstad
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443b18cea6
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Made sure ordering of matrices are ok.
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2006-05-09 14:13:09 +00:00 |
|
Truls Alexander Tangstad
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5b1af849dc
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Implemented Limma function for Affy workflow.
Extended ScatterPlot to take two datasets and updated code using it.
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2006-05-09 13:17:17 +00:00 |
|
Truls Alexander Tangstad
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fafa373e67
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Added categorygetter for PhenotypeDataset.
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2006-05-04 13:30:04 +00:00 |
|
Truls Alexander Tangstad
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fb7128138e
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Fixed floats in phenotype importer.
Added PrintFunction for debug-printing.
Added PhenotypeImportFunction to AffyWorkflow.
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2006-05-03 14:27:38 +00:00 |
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Truls Alexander Tangstad
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b757da5929
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Implemented PhenotypeDataset with tests.
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2006-05-03 14:04:28 +00:00 |
|
Truls Alexander Tangstad
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91c1d8ea8b
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Fixed getting empty selections.
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2006-05-02 15:40:54 +00:00 |
|
Truls Alexander Tangstad
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56c07c6392
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Implemented Dataset.get_indices() and extended Dataset.get_identifiers() to convert between indices and identifiers and subsets thereof.
Also added tests.
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2006-05-02 14:06:48 +00:00 |
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Truls Alexander Tangstad
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bda48169fe
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Fixed imports to make test run.
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2006-05-02 13:21:24 +00:00 |
 Arnar Flatberg
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a2e4392a72
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Complete rewrite of dataset class, with (all) the necessary updates
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2006-04-24 09:53:07 +00:00 |
|
Einar Ryeng
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4bdeef05f6
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* annotations.py: The Annotations class now work. Querying along any
axis is supported, but only two dimensional Annotations can be created.
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2006-04-16 23:30:01 +00:00 |
|
Arnar Flatberg
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23fb12f53a
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First commit
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2006-04-16 22:57:50 +00:00 |
|
Einar Ryeng
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eb45c125aa
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* annotations.py: Annotation class for two-way annotations. Does only support
exactly two dimensions.
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2006-04-16 22:06:29 +00:00 |