 Einar Ryeng
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c7bfefe358
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Fixed resnik distances.
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2007-05-15 18:16:07 +00:00 |
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Einar Ryeng
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335efe231a
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go-gene-matrix takes a GO vs. GO distance matrix and a gene-go-mapping file
and makes a gene vs. go distance matrix based on the shortest distances found
between each gene and go term.
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2007-05-15 18:15:51 +00:00 |
|
Einar Ryeng
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f1301be67a
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go-distance update.
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2007-04-26 18:54:34 +00:00 |
|
Einar Ryeng
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fefaffb2e3
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go-distance seems to be able to calculate resnik now. Not asserted with
calculations by hand.
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2007-04-04 19:08:50 +00:00 |
|
Einar Ryeng
|
28f0f53e8a
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go-distance script soon calculating resnik distances.
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2007-04-03 13:08:48 +00:00 |
|
Einar Ryeng
|
a5c3a1f154
|
A couple of extra lines of code in a script.
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2007-03-27 13:02:22 +00:00 |
|
Einar Ryeng
|
728c334e8a
|
ontology distance script now accumulates annotations correctly.
|
2007-03-26 23:15:14 +00:00 |
|
Einar Ryeng
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11eb3306b9
|
Works a bit better.
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2007-03-26 17:18:26 +00:00 |
 Arnar Flatberg
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947cf8385f
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Annotations on yeast from Stanford mdb.
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2007-03-23 20:51:04 +00:00 |
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Einar Ryeng
|
0904a59310
|
Gene ontolgy distance script in C. Will hopefully speed up calculations when
finished.
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2007-03-23 13:25:07 +00:00 |
|
Einar Ryeng
|
3dc1867be4
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Added entrez-go-mapping that maps entrez IDs to GO terms based on a file of the form:
affy_id ::: geneid_1 /// geneid_2 ::: go(bp) ::: go(cc) ::: go(mf)
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2007-03-15 23:47:24 +00:00 |
|
Einar Ryeng
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6fe4ff3c59
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Added scripts folder for small but useful scripts.
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2007-03-15 12:46:41 +00:00 |