Projects/laydi
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54 Commits

Author SHA1 Message Date
Arnar Flatberg 0b58c5ea28 Switch to numpy (scipy_version>1.0) changes 2006-08-31 10:04:19 +00:00
Arnar Flatberg a670fc6b61 cleaning up 2006-08-30 13:39:32 +00:00
Arnar Flatberg fc2891bad8 removed SinePlot and and added general selection sensitive function thingy 2006-08-30 13:21:08 +00:00
Arnar Flatberg fc21c58ab3 Added icons to navigator 2006-08-30 10:27:45 +00:00
Arnar Flatberg ae7a6a5a0e Added extended toolbar with selection freeze 2006-08-29 09:03:28 +00:00
Arnar Flatberg 97e652edce fixes 2006-08-28 12:06:05 +00:00
Arnar Flatberg edd7d47cf1 Added regular scatterplot with size and color options 2006-08-14 16:19:51 +00:00
Arnar Flatberg a5c5987fc3 updated Lineview and Plot 2006-08-14 15:01:34 +00:00
Arnar Flatberg 8016d732d2 Added LineViewPLot and renamed ScatterPlot to ScatterMarkerPlot 2006-08-14 09:26:54 +00:00
Arnar Flatberg 2e2fa85727 removed message, removed draw from release_select, added view limits update in scatterplot 2006-08-09 08:02:38 +00:00
Arnar Flatberg e846a83cb8 removed toolbar message on select 2006-08-08 14:37:31 +00:00
Arnar Flatberg 25f102bafd removed ac.xlear() 2006-08-08 11:09:59 +00:00
Einar Ryeng 57cb203316 Closes #14 2006-08-04 09:32:11 +00:00
Einar Ryeng 4c716e9428 NetworkPlot now works, but does not allow node colors or sizes to be passed as keyword arguments. 2006-08-03 14:30:06 +00:00
Einar Ryeng 44b676f726 system/plots.py: Fixed a few bugs in NetworkPlot. 2006-08-01 14:26:33 +00:00
Einar Ryeng b3d681ef16 * system/plots.py: Added NetworkPlot, which may or may not work correctly. 
* system/dataset.py: Removed a few lines of obsolete code.
 2006-08-01 13:22:39 +00:00
Einar Ryeng 61da4f562e Added LICENCE (the pure GPL text copied verbatim from gnu.org) and README. 
Started to add a NetworkX plot in plots.py
 2006-07-31 14:57:24 +00:00
Einar Ryeng 87f87e36c8 * system/fluents.py: Fixed a bug where the the application tried to load 
a toolbar from None

 * system/plots.py: Fixed MainView.insert_view that was a no-op when in large
   view.

 * system/dataset.py: Changed __str__ of dataset to also show names of dimensions.
 2006-07-21 14:30:09 +00:00
Einar Ryeng aca9a47f56 Toolbars work again. 2006-06-01 13:51:16 +00:00
Einar Ryeng 0670c42bd4 Drag and drop from the navigator to the viewframes now work. 2006-05-29 19:14:48 +00:00
Einar Ryeng 581cef75ae Fixed plot things. A plot can only be attached to one view now. 2006-05-29 11:24:33 +00:00
Einar Ryeng 62c1d79dac Fixed large/small plot bug by adding ViewFrames that contains plots. 2006-05-22 21:43:24 +00:00
Truls Alexander Tangstad 5b1af849dc Implemented Limma function for Affy workflow. 
Extended ScatterPlot to take two datasets and updated code using it.
 2006-05-09 13:17:17 +00:00
Truls Alexander Tangstad 0db25f1dd7 Changed use of Dataset.get_matrix() to Dataset.asarray() and removed it. 2006-05-05 14:43:53 +00:00
Truls Alexander Tangstad a613f0a3fa Made scatter use the new methods for index/identifier-conversion. 2006-05-03 11:40:12 +00:00
Truls Alexander Tangstad 2db1fc774e Removed whitespace. 2006-05-02 13:14:07 +00:00
Reidar Strand Hagen e363f1cd7d Signals for drag'n'drop added to new plots 2006-05-02 12:38:00 +00:00
Reidar Strand Hagen 4e4150236f Drag'n'drop for plots 2006-05-02 11:09:55 +00:00
Truls Alexander Tangstad a2d3a9d5cc Made PCA more generic, even enable PCA of existing PCA-results as dimension names are modified to handle dimension name component in input. 2006-04-28 11:44:55 +00:00
Truls Alexander Tangstad 5bb93af6f0 Changed generic observer pattern and project dependency in plots to be a two-way selection-listener model. 
The project listens to selections done in plot and broadcasts it back to all plots (including source) which allows them to redraw properly.
 2006-04-27 14:38:48 +00:00
Truls Alexander Tangstad 06805aa5e4 Changed colormap for LinePlot. 2006-04-27 12:05:20 +00:00
Truls Alexander Tangstad 3683f6c2e9 Fixed labels for scatter plots. Set correct labels in go_workflow. Removed extra loadings plot. 2006-04-27 11:38:40 +00:00
Truls Alexander Tangstad 969006015a Added LinePlot used by Affy importer. 2006-04-27 11:03:11 +00:00
Truls Alexander Tangstad 21edeecdc3 Add toolbar support to plots, with home made selection support <phew>. 2006-04-26 12:11:23 +00:00
Truls Alexander Tangstad 9d7a5ba769 Optimized plot selection. 2006-04-25 10:08:12 +00:00
Einar Ryeng 359903c5ab Made system a package. 2006-04-25 09:53:35 +00:00
Einar Ryeng 179a2f88a9 The navigator now displays the plots and data in a tree that shows the ancestry information. 2006-04-24 14:52:21 +00:00
Truls Alexander Tangstad 6c72dec7fa Removed need to provide plots with project/workflow on creation, is instead injected by project itself when added to it. 2006-04-24 14:42:45 +00:00
Truls Alexander Tangstad b807f27874 Fixed deselection in scatterplot. 2006-04-24 14:28:30 +00:00
Truls Alexander Tangstad 3fb7d06f4e Fixed problem with plots accumulating. 2006-04-24 14:25:24 +00:00
Arnar Flatberg a2e4392a72 Complete rewrite of dataset class, with (all) the necessary updates 2006-04-24 09:53:07 +00:00
Einar Ryeng efcdafe843 * The New project toolbar button now works. A druid will display the 
available workflows and ask you to select one of them. There are still
   a couple of unresolved issues, but it works, so i upload it to ease
   the use of the program.
 2006-04-22 21:46:44 +00:00
Truls Alexander Tangstad 832827bd5a Removed unused code. 2006-04-21 14:45:01 +00:00
Einar Ryeng c09f2ceb92 * fluent, *.py: Data and plots returned from functions will now show up in 
the navigator window.
 2006-04-20 14:29:13 +00:00
Einar Ryeng f394610724 * fluent: removed old, non-working code. 2006-04-20 10:34:50 +00:00
Arnar Flatberg 6a4ae8ecf1 mainly overhaul of observers, and removal of project singleton 2006-04-20 10:27:58 +00:00
Arnar Flatberg 0eebd9436c object selection fix 2006-04-19 18:50:10 +00:00
Arnar Flatberg 56dac31529 Updated plots to demonstrate current selection update 2006-04-19 18:25:44 +00:00
Arnar Flatberg 1091bea0e9 category data and plot selection update| 2006-04-19 10:37:44 +00:00
Arnar Flatberg a8937ededb mainly play in plots 2006-04-18 14:25:46 +00:00