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532 Commits

Author SHA1 Message Date
Arnar Flatberg 7f1f639ee7 Updates on metric, whitespace 2007-03-14 16:31:25 +00:00
Arnar Flatberg 22f6e3284c whitespace 2007-03-14 16:30:18 +00:00
Arnar Flatberg 818dc0b2b0 added a logger for constructor calls 2007-03-14 16:27:23 +00:00
Arnar Flatberg 212da78933 correct comp update 2007-03-14 16:17:21 +00:00
Arnar Flatberg 00dd3e8d9d added validation on identifiers input 2007-03-14 16:06:16 +00:00
Arnar Flatberg 51435d9fdc Fixed dataset type to network 2007-03-14 10:27:08 +00:00
Arnar Flatberg ac447546a2 Annotation file for dim: gene_id 2007-03-14 10:26:11 +00:00
Arnar Flatberg a9981779a6 network of articles 2007-03-14 10:25:35 +00:00
Arnar Flatberg 9cbefb5705 in write_ftsv: adjusted so it splits specifically on tab, whitespace allowed in annotations 2007-03-14 10:24:49 +00:00
Arnar Flatberg 6cbf6d0689 Initial commit of small example test workflow 2007-03-13 15:24:20 +00:00
Einar Ryeng 6b2737efb9 Added a line. 2007-03-09 14:33:09 +00:00
Einar Ryeng f61bc353a9 Typofix 2007-03-09 14:30:40 +00:00
Arnar Flatberg 5be2f1faf6 Initial import of Iris data 2007-03-04 21:00:39 +00:00
Einar Ryeng ae9a207a71 Added a tag column in the GO browser to help link it to selections. 2007-03-01 19:13:13 +00:00
Einar Ryeng 442b5fed5f Moved all files to the smokers-small subdirectory. 2007-03-01 19:12:40 +00:00
Einar Ryeng f31795ac2a Corrected erroneous checkin. 2007-03-01 15:27:50 +00:00
Einar Ryeng e01dd578cd Preserves PYTHONPATH 2007-03-01 15:27:24 +00:00
Einar Ryeng ff070e5312 Preserves PYTHONPATH. 2007-03-01 15:26:38 +00:00
Einar Ryeng 28e6c52f78 Fixed bug with hidden dimensions. 2007-03-01 15:06:33 +00:00
Arnar Flatberg d699afa6a5 fixed bu when trying to drag anything over an empty view 2007-03-01 15:03:53 +00:00
Arnar Flatberg f8f3bd712e Smoker example data 2007-03-01 15:01:30 +00:00
Einar Ryeng 6101bf850c Changed CategoryDataset ftsv files to be written with 0 and 1 instead of True and False. 2007-02-28 16:33:11 +00:00
Einar Ryeng 89636962a7 Added Workflow.get_data_file_name() which returns the full path to a given
data file, or None if the file does not exist. This is tested in the test
workflow.
2007-02-28 14:56:24 +00:00
Einar Ryeng 934640ea62 Searches for /etc/fluentsrc and ~/.fluents configuration files. Adds the
home configuration variable.
2007-02-28 14:07:33 +00:00
Arnar Flatberg 281337251d Added selection of lines in network plot 2007-02-27 21:19:24 +00:00
Arnar Flatberg 78183df0e9 Alignment of function boxes 2007-02-27 18:14:58 +00:00
Arnar Flatberg b754a5df44 Update from change of plots/view 2007-02-27 16:31:18 +00:00
Arnar Flatberg 61cfd00558 Division of plots -> view/plots 2007-02-27 16:28:03 +00:00
Arnar Flatberg 059cddbc16 Division of plots -> view/plots 2007-02-27 16:27:39 +00:00
Einar Ryeng bf1ad1be87 Removed old help function. 2007-02-27 16:25:48 +00:00
Einar Ryeng 1ba4bf5f82 Initial config parser support. 2007-02-27 16:08:22 +00:00
Arnar Flatberg 686a1fdcd1 network/venn plot now maximizes the space available 2007-02-27 15:42:27 +00:00
Arnar Flatberg d27278241c oops ... (broken code fixed) 2007-02-27 15:08:00 +00:00
Arnar Flatberg 4de65f1085 Clean up 2007-02-27 15:05:21 +00:00
Einar Ryeng f73a6db0ee Added ctrl+arrows to navigate between plots. 2007-02-26 23:00:25 +00:00
Einar Ryeng eacb44f32a Removed "Edit" menu. 2007-02-26 22:12:32 +00:00
Einar Ryeng d040f11c2f Added identifier list update on selection changed. 2007-02-26 18:02:34 +00:00
Einar Ryeng 537dc9f0ec Cleanup of selection browser module. Added comments, fixed some bits of code. 2007-02-26 14:35:31 +00:00
Arnar Flatberg c0bbe24c39 No selections in scatter marker now updates to no selection instead of last selection 2007-02-26 12:11:28 +00:00
Arnar Flatberg a6fbef9cfa scatter plot selected markers are now on top (visible) 2007-02-26 11:20:02 +00:00
Arnar Flatberg 2f60d0663d Clean up of import statements 2007-02-26 09:08:50 +00:00
Arnar Flatberg 5ed602f355 Lots of changes .... (new selector, mode updates, histogram selection, ++) 2007-02-26 08:00:36 +00:00
Arnar Flatberg 3ee8439e07 Added selection listeners to plots in context menu 2007-02-26 07:58:33 +00:00
Arnar Flatberg a614908436 Size of current selection is now updated in details 2007-02-23 11:12:03 +00:00
Arnar Flatberg 41e8ed511b Fixed dim_cursor_changed to to use the correct treemodel, and added show/hide on selection details 2007-02-23 10:46:04 +00:00
Arnar Flatberg 0d8702bb71 added show/hide on dimensions 2007-02-21 19:57:27 +00:00
Einar Ryeng 2bae169f38 Annotation display now works (sort of). 2007-02-21 16:39:04 +00:00
Arnar Flatberg 28aca8c621 added project to selection controller 2007-02-21 13:57:48 +00:00
Arnar Flatberg 8c03338b75 hypergeometric test (scipy version has errors) 2007-02-21 13:03:51 +00:00
Arnar Flatberg 48165d1aed Updated the selection controller with sorting ++ 2007-02-21 12:41:37 +00:00