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update

This commit is contained in:
Arnar Flatberg 2006-08-14 11:52:26 +00:00
parent 8016d732d2
commit fc8b2e601f
1 changed files with 7 additions and 6 deletions
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13
workflows/test_workflow.py
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@ -101,9 +101,10 @@ class TestDataFunction(workflow.Function):
def run(self): def run(self):
logger.log('notice', 'Injecting foo test data') logger.log('notice', 'Injecting foo test data')
x = randn(20,30) x = randn(500,30)
X = dataset.Dataset(x) X = dataset.Dataset(x)
p = plots.ScatterPlot(X, X, 'rows', 'rows', '0_1', '0_2') p = plots.ScatterMarkerPlot(X, X, 'rows', 'rows', '0_1', '0_2',name='p')
p2 = plots.ScatterMarkerPlot(X, X, 'rows', 'rows', '0_1', '0_2',name='p2')
graph = networkx.XGraph() graph = networkx.XGraph()
for x in 'ABCDEF': for x in 'ABCDEF':
for y in 'ADE': for y in 'ADE':
@ -112,8 +113,8 @@ class TestDataFunction(workflow.Function):
ds_plot = plots.NetworkPlot(ds) ds_plot = plots.NetworkPlot(ds)
print ds.get_dim_name() print ds.get_dim_name()
ds_scatter = plots.ScatterPlot(ds, ds, 'rows_0', 'rows_0', '0_1', '0_2') ds_scatter = plots.ScatterMarkerPlot(ds, ds, 'rows_0', 'rows_0', '0_1', '0_2')
return [X, ds, plots.SinePlot(), p, ds_plot, ds_scatter] return [X, ds, plots.SinePlot(), p, ds_plot, ds_scatter,p2]
class DatasetLog(workflow.Function): class DatasetLog(workflow.Function):
def __init__(self): def __init__(self):
@ -259,7 +260,7 @@ class PCAFunction(workflow.Function):
# cleanup # cleanup
rpy.r.rm(["t", "m"]) rpy.r.rm(["t", "m"])
loading_plot = plots.ScatterPlot(P, P, 'ids','component','1','2', "Loadings") loading_plot = plots.ScatterMarkerPlot(P, P, 'ids','component','1','2', "Loadings")
score_plot = plots.ScatterPlot(T, T,'filename','component','1','2', "Scores") score_plot = plots.ScatterMarkerPlot(T, T,'filename','component','1','2', "Scores")
return [T, P, loading_plot, score_plot] return [T, P, loading_plot, score_plot]