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Fixed bug in ftsv save and open dialogs. The save dialog now looks as intended. 

Added the possibility to load several datasets at once. Error handling should still
be improved.
This commit is contained in:
Einar Ryeng 2007-01-16 12:28:56 +00:00
parent ea4c0af6de
commit f612dda72f
2 changed files with 24 additions and 15 deletions
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12
fluents/navigator.py
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@ -205,12 +205,15 @@ class NavigatorMenu(gtk.Menu):
def on_load_dataset(self, item, navigator): def on_load_dataset(self, item, navigator):
dialog = gtk.FileChooserDialog('Load dataset') dialog = gtk.FileChooserDialog('Load dataset')
dialog.set_action(gtk.FILE_CHOOSER_ACTION_OPEN)
dialog.add_buttons(gtk.STOCK_CANCEL, gtk.RESPONSE_CANCEL, gtk.STOCK_OPEN, gtk.RESPONSE_OK) dialog.add_buttons(gtk.STOCK_CANCEL, gtk.RESPONSE_CANCEL, gtk.STOCK_OPEN, gtk.RESPONSE_OK)
dialog.set_select_multiple(True)
retval = dialog.run() retval = dialog.run()
if retval in [gtk.RESPONSE_CANCEL, gtk.RESPONSE_DELETE_EVENT]: if retval in [gtk.RESPONSE_CANCEL, gtk.RESPONSE_DELETE_EVENT]:
pass pass
elif retval == gtk.RESPONSE_OK: elif retval == gtk.RESPONSE_OK:
fd = open(dialog.get_filename()) for filename in dialog.get_filenames():
fd = open(filename)
ds = dataset.read_ftsv(fd) ds = dataset.read_ftsv(fd)
fd.close() fd.close()
@ -230,13 +233,14 @@ class NavigatorMenu(gtk.Menu):
def on_save_dataset(self, item, navigator): def on_save_dataset(self, item, navigator):
dialog = gtk.FileChooserDialog('Save dataset') dialog = gtk.FileChooserDialog('Save dataset')
dialog.set_action(gtk.FILE_CHOOSER_ACTION_SAVE)
dialog.add_buttons(gtk.STOCK_CANCEL, gtk.RESPONSE_CANCEL, gtk.STOCK_SAVE, gtk.RESPONSE_OK) dialog.add_buttons(gtk.STOCK_CANCEL, gtk.RESPONSE_CANCEL, gtk.STOCK_SAVE, gtk.RESPONSE_OK)
dialog.set_current_name("%s.ftsv" % self.dataset.get_name())
retval = dialog.run() retval = dialog.run()
if retval in [gtk.RESPONSE_CANCEL, gtk.RESPONSE_DELETE_EVENT]: if retval in [gtk.RESPONSE_CANCEL, gtk.RESPONSE_DELETE_EVENT]:
print "Cancelled" logger.log("debug", "Cancelled save dataset")
elif retval == gtk.RESPONSE_OK: elif retval == gtk.RESPONSE_OK:
print "OK" logger.log("debug", "Saving dataset as: %s" % dialog.get_filename())
print dialog.get_filename()
fd = open(dialog.get_filename(), 'w') fd = open(dialog.get_filename(), 'w')
dataset.write_ftsv(fd, self.dataset) dataset.write_ftsv(fd, self.dataset)
fd.close() fd.close()

5
workflows/go_workflow.py
View File

@ -1,5 +1,6 @@
import gtk import gtk
from fluents import dataset, logger, plots, workflow, fluents from fluents import dataset, logger, plots, workflow, fluents
from fluents.lib import blmfuncs
import geneontology import geneontology
#import gostat #import gostat
from scipy import array, randn, log, ones, zeros from scipy import array, randn, log, ones, zeros
@ -123,6 +124,10 @@ class GoWorkflow (workflow.Workflow):
go.add_function(SaveDistancesFunction()) go.add_function(SaveDistancesFunction())
self.add_stage(go) self.add_stage(go)
blm = workflow.Stage('blm', 'Bilinear Analysis')
blm.add_function(blmfuncs.PCA())
self.add_stage(blm)
class LoadGOFunction(workflow.Function): class LoadGOFunction(workflow.Function):
def __init__(self): def __init__(self):