in write_ftsv: adjusted so it splits specifically on tab, whitespace allowed in annotations
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parent
6cbf6d0689
commit
9cbefb5705
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@ -78,7 +78,7 @@ def read_annotations_file(filename):
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## Read the first line, which contains the dimension name and
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## Read the first line, which contains the dimension name and
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## annotation names.
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## annotation names.
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line = fd.readline()
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line = fd.readline()
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values = [x.strip() for x in line.split()]
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values = [x.strip() for x in line.split('\t')]
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dimname = values[0]
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dimname = values[0]
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annotation_names = values[1:]
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annotation_names = values[1:]
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annotation_dicts = [{} for x in annotation_names]
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annotation_dicts = [{} for x in annotation_names]
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@ -86,7 +86,7 @@ def read_annotations_file(filename):
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## Read the lines containing the annotations. The first value on
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## Read the lines containing the annotations. The first value on
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## each line is an id along the dimension.
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## each line is an id along the dimension.
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while line:
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while line:
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values = [x.strip() for x in line.split()]
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values = [x.strip() for x in line.split('\t')]
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for i, x in enumerate(values[1:]):
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for i, x in enumerate(values[1:]):
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annotation_dicts[i][values[0]] = x
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annotation_dicts[i][values[0]] = x
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line = fd.readline()
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line = fd.readline()
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