Fixed selection in DAG-plot to work both with and without IC set.
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b334e94b15
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94f4b276b9
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@ -633,17 +633,17 @@ class DagPlot(plots.Plot):
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def _add_ic_spin_buttons(self):
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def _add_ic_spin_buttons(self):
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"""Adds spin buttons to the toolbar for selecting minimum and maximum
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"""Adds spin buttons to the toolbar for selecting minimum and maximum
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threshold values on information content."""
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threshold values on information content."""
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sb_min = gtk.SpinButton()
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sb_min = gtk.SpinButton(digits=2)
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sb_min.set_range(0, 100)
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sb_min.set_range(0, 100)
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sb_min.set_value(1)
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sb_min.set_value(0)
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sb_min.set_increments(1, 3)
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sb_min.set_increments(.1, 1.)
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sb_min.connect('value-changed', self._on_ic_value_changed)
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sb_min.connect('value-changed', self._on_ic_value_changed)
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self._ic_sb_min = sb_min
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self._ic_sb_min = sb_min
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sb_max = gtk.SpinButton()
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sb_max = gtk.SpinButton(digits=2)
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sb_max.set_range(0, 100)
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sb_max.set_range(0, 100)
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sb_max.set_value(1)
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sb_max.set_value(1)
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sb_max.set_increments(1, 3)
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sb_max.set_increments(.1, 1.)
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sb_max.connect('value-changed', self._on_ic_value_changed)
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sb_max.connect('value-changed', self._on_ic_value_changed)
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self._ic_sb_max = sb_max
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self._ic_sb_max = sb_max
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@ -694,7 +694,7 @@ class DagPlot(plots.Plot):
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icnodes = ic.existing_identifiers('go-terms', self.nodes)
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icnodes = ic.existing_identifiers('go-terms', self.nodes)
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icindices = ic.get_indices('go-terms', icnodes)
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icindices = ic.get_indices('go-terms', icnodes)
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a = ravel(ic.asarray()[icindices])
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a = ravel(ic.asarray()[icindices])
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ic_good = set(array(icnodes)[(a>ic_min) & (a<ic_max)])
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ic_good = set(array(icnodes)[(a>=ic_min) & (a<=ic_max)])
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sizes = zeros(len(self.nodes))
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sizes = zeros(len(self.nodes))
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visible = set()
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visible = set()
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@ -728,7 +728,10 @@ class DagPlot(plots.Plot):
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assert y1<=y2
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assert y1<=y2
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index = nonzero((xdata>x1) & (xdata<x2) & (ydata>y1) & (ydata<y2))[0]
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index = nonzero((xdata>x1) & (xdata<x2) & (ydata>y1) & (ydata<y2))[0]
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ids = self.visible.intersection([self.nodes[i] for i in index])
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if getattr(main.workflow, 'current_ic', None) != None:
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ids = self.visible.intersection([self.nodes[i] for i in index])
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else:
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ids = set([self.nodes[i] for i in index])
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ids = self.update_selection(ids, key)
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ids = self.update_selection(ids, key)
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self.selection_listener(self.current_dim, ids)
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self.selection_listener(self.current_dim, ids)
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@ -798,11 +801,15 @@ class DagPlot(plots.Plot):
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map_vec = zeros(len(self.nodes))
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map_vec = zeros(len(self.nodes))
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for i, n in enumerate(self.nodes):
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for i, n in enumerate(self.nodes):
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map_vec[i] = d.get(n, -1)
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map_vec[i] = d.get(n, vec_min)
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# update facecolors
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# update facecolors
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self.node_collection.set_array(map_vec)
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self.node_collection.set_array(map_vec)
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self.node_collection.set_clim(vec_min, vec_max)
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self.node_collection.set_clim(vec_min, vec_max)
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self.node_collection.update_scalarmappable() #sets facecolors from array
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self.node_collection.update_scalarmappable() #sets facecolors from array
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self.canvas.draw()
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self._ic_sb_min.set_range(0, vec_max)
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self._ic_sb_min.set_value(vec_min)
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self._ic_sb_max.set_range(0, vec_max)
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self._ic_sb_max.set_value(vec_max)
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self.canvas.draw()
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