FIXING STUFF!

Rename should be complete or almost so.

scripts/geneontology/entrez-go-mapping

@@ -52,7 +52,7 @@ def parse_options():
                   help="Output annotations in the cellular component tree.",
                   action="store_true", default=False)
     op.add_option('-d', '--output-dataset',
-                  help="Export as ftsv (Fluents dataset) file.")
+                  help="Export as ftsv (Laydi dataset) file.")
     op.add_option('-m', '--molecular-function', dest="mf",
                   help="Output annotations in the molecular function tree.",
                   action="store_true", default=False)

scripts/geneontology/go-gene-matrix

@@ -3,7 +3,7 @@
 import os, sys
 import getopt
 sys.path.append('../..')
-from fluents import dataset
+from laydi import dataset
 import numpy
 
 max_val = numpy.inf