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Removed workflow being dependent on rpy by putting the import within the run function of affymatrix import.

This commit is contained in:
Truls Alexander Tangstad 2006-04-22 20:48:44 +00:00
parent 26f16acc9c
commit 357cd1a1a6
1 changed files with 1 additions and 1 deletions
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2
workflows/go_workflow.py
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@ -6,7 +6,6 @@ import plots
import dataset import dataset
#import geneontology #import geneontology
#import gostat #import gostat
import rpy
from scipy import array,randn from scipy import array,randn
import cPickle import cPickle
@ -172,6 +171,7 @@ class CelFileImportFunction(Function):
Function.__init__(self, 'cel_import', 'Import Affy') Function.__init__(self, 'cel_import', 'Import Affy')
def run(self, data): def run(self, data):
import rpy
chooser = gtk.FileChooserDialog(title="Select cel files...", parent=None, chooser = gtk.FileChooserDialog(title="Select cel files...", parent=None,
action=gtk.FILE_CHOOSER_ACTION_OPEN, action=gtk.FILE_CHOOSER_ACTION_OPEN,
buttons=(gtk.STOCK_CANCEL, gtk.RESPONSE_CANCEL, buttons=(gtk.STOCK_CANCEL, gtk.RESPONSE_CANCEL,