Removed obsolete module annotations.

workflows/go_workflow.py

@@ -1,16 +1,16 @@
 import gtk
 from system import dataset, logger, plots, workflow
-from system.annotations import Annotations
 #import geneontology
 #import gostat
 from scipy import array,randn,log
 import cPickle
 
-class EinarsWorkflow (workflow.Workflow):
+class GOWorkflow (workflow.Workflow):
 
-    name = 'Test Workflow'
+    name = 'Gene Ontology Workflow'
     ident = 'go'
     description = 'Gene Ontology Workflow. This workflow currently serves as a general testing workflow.'
+
     def __init__(self, app):
         workflow.Workflow.__init__(self, app)
 
@@ -26,7 +26,6 @@ class EinarsWorkflow (workflow.Workflow):
         self.add_stage(preproc)
 
         go = workflow.Stage('go', 'Gene Ontology Data')
-        go.add_function(LoadAnnotationsFunction())
         go.add_function(GODistanceFunction())
         self.add_stage(go)
 
@@ -42,8 +41,6 @@ class EinarsWorkflow (workflow.Workflow):
         save.add_function(DatasetSaveFunction())
         self.add_stage(save)
         
-        logger.log('debug', '\tEinar\'s workflow is now active')
-
 class LoadAnnotationsFunction(workflow.Function):
 
     def __init__(self):